RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 KRT5P13647 590 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 SLC5A1P13866 664 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 KCNA4P22459 653 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 STX17P56962 302 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 SRGAP1Q7Z6B7 1085 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
SMAD9-203ENST00000399275 TRIM42Q8IWZ5 723 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 IQUBQ8NA54 791 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 PIP4K2CQ8TBX8 421 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
SMAD9-203ENST00000399275 HOMER3Q9NSC5 361 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 NFE2L3Q9Y4A8 694 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 FAM169AQ9Y6X4 670 aa10.57□□□□□ -0.72
SMAD9-203ENST00000399275 CCDC151A5D8V7 595 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 DAB1O75553 588 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 KRT14P02533 472 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 CNGA1P29973 690 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 NUP58Q9BVL2 599 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ITGB1BP2Q9UKP3 347 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 SH3BP5O60239 455 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 HS2ST1Q7LGA3 356 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 GSTA5Q7RTV2 222 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 SRLQ86TD4 932 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 PAWRQ96IZ0 340 aaKnown RBP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 OSBPL1AQ9BXW6 950 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 LRRIQ1Q96JM4 1722 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 PALM3A6NDB9 673 aaPredicted RBP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ZSCAN20P17040 1043 aaPredicted RBP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ANKRD20A4Q4UJ75 823 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 CCDC93Q567U6 631 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ANKRD20A8PQ5CZ79 823 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ANKRD20A2Q5SQ80 823 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 ANKRD20A1Q5TYW2 823 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 IKBKBO14920 756 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 JAK2O60674 1132 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 LMNAP02545 664 aaKnown RBP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 IGHMBP2P38935 993 aaKnown RBP10.56□□□□□ -0.72
SMAD9-203ENST00000399275 LONRF2Q1L5Z9 754 aa10.56□□□□□ -0.72
SMAD9-203ENST00000399275 CRYMQ14894 314 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 PALM2Q8IXS6 379 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 KIF9Q9HAQ2 790 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 MRGBPQ9NV56 204 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 RANBP6O60518 1105 aaKnown RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 TRAIPQ9BWF2 469 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 TRIM55Q9BYV6 548 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 TMA7Q9Y2S6 64 aaKnown RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 WDR46O15213 610 aaKnown RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 PFKFB2O60825 505 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 CAPN1P07384 714 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 KRT2P35908 639 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 POSTNQ15063 836 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 AKAP4Q5JQC9 854 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 NRBF2Q96F24 287 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 TSKSQ9UJT2 592 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 UTP11Q9Y3A2 253 aaKnown RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 DENND4BO75064 1496 aaPredicted RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 RTL9Q8NET4 1388 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 SEC31AO94979 1220 aaKnown RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 APBA1Q02410 837 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 ZBTB41Q5SVQ8 909 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 SIX5Q8N196 739 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 THEMISQ8N1K5 641 aaPredicted RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
SMAD9-203ENST00000399275 CDC23Q9UJX2 597 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 ANGPTL2Q9UKU9 493 aa10.55□□□□□ -0.72
SMAD9-203ENST00000399275 I3L4J1 428 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 CMA1P23946 247 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 ARL1P40616 181 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-203ENST00000399275 TRPC1P48995 793 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 ST13P50502 369 aaKnown RBP10.54□□□□□ -0.72
SMAD9-203ENST00000399275 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 FERMT1Q9BQL6 677 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
SMAD9-203ENST00000399275 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 RGS16O15492 202 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-203ENST00000399275 GAS8O95995 478 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 SNX1Q13596 522 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 PLCB4Q15147 1175 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 OLFML2BQ68BL8 750 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 MGARPQ8TDB4 240 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 IQCDQ96DY2 449 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 MYO1AQ9UBC5 1043 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 SAR1BQ9Y6B6 198 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 MYOM2P54296 1465 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 ANXA1P04083 346 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 CTNNA1P35221 906 aaKnown RBP10.54□□□□□ -0.72
SMAD9-203ENST00000399275 KRT80Q6KB66 452 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
SMAD9-203ENST00000399275 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms