RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 C2CD5Q86YS7 1000 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
RCC1-204ENST00000398958 NLRP12P59046 1061 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 CC2D1AQ6P1N0 951 aaPredicted RBP12.85□□□□□ -0.35
RCC1-204ENST00000398958 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 NCAPHQ15003 741 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
RCC1-204ENST00000398958 SEC23AQ15436 765 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 AOC3Q16853 763 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
RCC1-204ENST00000398958 REXO1L1PQ8IX06 675 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 RASGRP4Q8TDF6 673 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.352e-47■□□□□ 10.3
RCC1-204ENST00000398958 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
RCC1-204ENST00000398958 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
RCC1-204ENST00000398958 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
RCC1-204ENST00000398958 GYS2P54840 703 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 PDE4BQ07343 736 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 ZNF174Q15697 407 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 DPF2Q92785 391 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 CHD4Q14839 1912 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 MPHOSPH10O00566 681 aaKnown RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 SERPINC1P01008 464 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 UBASH3AP57075 661 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 EPSTI1Q96J88 318 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
RCC1-204ENST00000398958 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 ECM29Q5VYK3 1845 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
RCC1-204ENST00000398958 AFMP43652 599 aa12.83□□□□□ -0.35
RCC1-204ENST00000398958 PKN1Q16512 942 aa12.83□□□□□ -0.35
RCC1-204ENST00000398958 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.35
RCC1-204ENST00000398958 CERS5Q8N5B7 392 aa12.83□□□□□ -0.35
RCC1-204ENST00000398958 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.35
RCC1-204ENST00000398958 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 RAD17O75943 681 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 DEXIO95424 95 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 SRGNP10124 158 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 CASQ1P31415 396 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 LMAN1P49257 510 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
RCC1-204ENST00000398958 CSRNP2Q9H175 543 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 RSPH14Q9UHP6 348 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
RCC1-204ENST00000398958 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 TRIM66O15016 1216 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 BMP6P22004 513 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 CDC25AP30304 524 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 GNG11P61952 73 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 NFIAQ12857 509 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 RESP18Q5W5W9 173 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 ZBTB9Q96C00 473 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 CWC15Q9P013 229 aaKnown RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 LCMT1Q9UIC8 334 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 PPP2R3AQ06190 1150 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 TMEM232C9JQI7 657 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 MYO1CO00159 1063 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
RCC1-204ENST00000398958 DHX58Q96C10 678 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
RCC1-204ENST00000398958 CACNA1SQ13698 1873 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 A0A087X0B3 334 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 PLSCR1O15162 318 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 SNAP25P60880 206 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 TROAPQ12815 778 aa12.81□□□□□ -0.36
RCC1-204ENST00000398958 SMYD4Q8IYR2 804 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms