RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 SLC35G1Q2M3R5 365 aa29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 DRC7Q8IY82 874 aa29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 SUPT20HQ8NEM7 779 aa29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 ZNF646O15015 1829 aaPredicted RBP29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 C10orf71Q711Q0 1435 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 SMTNL1A8MU46 457 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 TPM4P67936 248 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 NOM1Q5C9Z4 860 aaKnown RBP29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 DACT2Q5SW24 774 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 WWC2Q6AWC2 1192 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 CCDC125Q86Z20 511 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 CCDC34Q96HJ3 373 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 MTMR4Q9NYA4 1195 aa29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 ZNF219Q9P2Y4 722 aaPredicted RBP29.42■■■□□ 2.3
SHARPIN-202ENST00000398712 HEATR3Q7Z4Q2 680 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 CCDC12Q8WUD4 166 aaPredicted RBP29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 C7orf43Q8WVR3 580 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 MRFAP1L1Q96HT8 127 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 KCNQ5Q9NR82 932 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 SCN9AQ15858 1988 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 STXBP3O00186 592 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 GOLGA8HP0CJ92 632 aa29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 MDM2Q00987 491 aaPredicted RBP29.41■■■□□ 2.3
SHARPIN-202ENST00000398712 IGKV6D-41A0A0C4DH26 115 aa29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 PTGDRQ13258 359 aa29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 RRP36Q96EU6 259 aaKnown RBP29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 ZNF830Q96NB3 372 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 EHD4Q9H223 541 aa29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 TTC12Q9H892 705 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-202ENST00000398712 WNT7AO00755 349 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 AKR1B1P15121 316 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 POSTNQ15063 836 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 USP17L2Q6R6M4 530 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 KIAA0825Q8IV33 1275 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 SERTAD1Q9UHV2 236 aa29.39■■■□□ 2.3
SHARPIN-202ENST00000398712 CCDC194A0A1B0GVG4 234 aa29.39■■■□□ 2.29
SHARPIN-202ENST00000398712 SF3B2Q13435 895 aaKnown RBP29.39■■■□□ 2.29
SHARPIN-202ENST00000398712 SEC63Q9UGP8 760 aaKnown RBP29.39■■■□□ 2.29
SHARPIN-202ENST00000398712 PCDHA5Q9Y5H7 936 aa29.39■■■□□ 2.29
SHARPIN-202ENST00000398712 M0R2N6 131 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 IKBKBO14920 756 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 ASPRV1Q53RT3 343 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 PPP4R3BQ5MIZ7 849 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 TYW1BQ6NUM6 668 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 CLIP2Q9UDT6 1046 aa29.38■■■□□ 2.29
SHARPIN-202ENST00000398712 ACTN4O43707 911 aaKnown RBP29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 TTLL1O95922 423 aa29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 SHMT1P34896 483 aa29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 BAG6P46379 1132 aa29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 GRIPAP1Q4V328 841 aa29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 DHX36Q9H2U1 1008 aaKnown RBP29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 SERPINA10Q9UK55 444 aa29.37■■■□□ 2.29
SHARPIN-202ENST00000398712 AOC3Q16853 763 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 DEFB132Q7Z7B7 95 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 USP17L5A8MUK1 530 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 OFD1O75665 1012 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 PDHBP11177 359 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 MCM7P33993 719 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 RBM5P52756 815 aaKnown RBP eCLIP29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 NT5DC1Q5TFE4 455 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 ARL6IP4Q66PJ3 421 aaKnown RBP29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 USP49Q70CQ1 688 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 PDILTQ8N807 584 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 SYMPKQ92797 1274 aaKnown RBP29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 CCDC17Q96LX7 622 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 ZMYND12Q9H0C1 365 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 PCDHA6Q9UN73 950 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 PCDHA8Q9Y5H6 950 aa29.36■■■□□ 2.29
SHARPIN-202ENST00000398712 GREB1LQ9C091 1923 aaPredicted RBP29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 hCG_1984214I3L0E3 225 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 ADAMTS3O15072 1205 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 NAPAP54920 295 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 NFIAQ12857 509 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 ISM2Q6H9L7 571 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 RASGRP2Q7LDG7 609 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 FOXP4Q8IVH2 680 aaPredicted RBP29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 ZNF713Q8N859 430 aaPredicted RBP29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 SMARCE1Q969G3 411 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 PYM1Q9BRP8 204 aaKnown RBP29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 IDI2Q9BXS1 227 aa29.35■■■□□ 2.29
SHARPIN-202ENST00000398712 VWA3AA6NCI4 1184 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 NPM3O75607 178 aaKnown RBP29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 EPSTI1Q96J88 318 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 RIOX1Q9H6W3 641 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 FOXN1O15353 648 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 SNHG28P0DPA3 235 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 GNA11P29992 359 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 TRIML1Q8N9V2 468 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 C6orf50Q9HD87 102 aa29.34■■■□□ 2.29
SHARPIN-202ENST00000398712 SLFN14P0C7P3 912 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 PTGS1P23219 599 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 CCDC186Q7Z3E2 898 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 RASGRP4Q8TDF6 673 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 DHX58Q96C10 678 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 CPVLQ9H3G5 476 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 KCNF1Q9H3M0 494 aa29.33■■■□□ 2.29
SHARPIN-202ENST00000398712 SARSP49591 514 aaKnown RBP29.32■■■□□ 2.28
SHARPIN-202ENST00000398712 NCAPHQ15003 741 aa29.32■■■□□ 2.28
SHARPIN-202ENST00000398712 SOGA3Q5TF21 947 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms