RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SIRT5Q9NXA8 310 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 E9PSI1 815 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 P4HBP07237 508 aaKnown RBP4.66□□□□□ -1.66
CD47-203ENST00000398258 PLCB3Q01970 1234 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 CHRNEQ04844 493 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 SPPL2CQ8IUH8 684 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 DHX38Q92620 1227 aaKnown RBP4.66□□□□□ -1.66
CD47-203ENST00000398258 TMEM87BQ96K49 555 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 PWWP2AQ96N64 755 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 PLCD4Q9BRC7 762 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 CEP44Q9C0F1 390 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 KIAA1522Q9P206 1035 aaPredicted RBP4.66□□□□□ -1.66
CD47-203ENST00000398258 SAMM50Q9Y512 469 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 SNCAIPQ9Y6H5 919 aa4.66□□□□□ -1.66
CD47-203ENST00000398258 PNMA6FA0A0J9YX94 578 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 ETV3P41162 512 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 MAPK8P45983 427 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 RGS19P49795 217 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 NCKAP1LP55160 1127 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 ADAM17P78536 824 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 EAPPQ56P03 285 aaPredicted RBP4.65□□□□□ -1.67
CD47-203ENST00000398258 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
CD47-203ENST00000398258 FERMT3Q86UX7 667 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 ADGRG2Q8IZP9 1017 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 GIPC2Q8TF65 315 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 ACSF2Q96CM8 615 aaPredicted RBP4.65□□□□□ -1.67
CD47-203ENST00000398258 CEP131Q9UPN4 1083 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 PCDHB5Q9Y5E4 795 aa4.65□□□□□ -1.67
CD47-203ENST00000398258 A0A1B0GTL3 188 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 FSHBP01225 129 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 GSTT1P30711 240 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 MAGEA10P43363 369 aaPredicted RBP4.64□□□□□ -1.67
CD47-203ENST00000398258 SLURP1P55000 103 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 SEPT6Q14141 434 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 ENOX2Q16206 610 aaKnown RBP4.64□□□□□ -1.67
CD47-203ENST00000398258 ZFYVE27Q5T4F4 411 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 LDHDQ86WU2 507 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 KLHL14Q9P2G3 628 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 PPM1HQ9ULR3 514 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 PCDHA5Q9Y5H7 936 aa4.64□□□□□ -1.67
CD47-203ENST00000398258 UPK3BL1B0FP48 263 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 UPK3BL2E5RIL1 263 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 K7ESM1 405 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 NRDCO43847 1150 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 PRPF40AO75400 957 aaKnown RBP4.63□□□□□ -1.67
CD47-203ENST00000398258 PGRP06401 933 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 DUSP4Q13115 394 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 MRPL58Q14197 206 aaKnown RBP4.63□□□□□ -1.67
CD47-203ENST00000398258 SORCS2Q96PQ0 1159 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 WWC3Q9ULE0 1092 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 DUSP10Q9Y6W6 482 aa4.63□□□□□ -1.67
CD47-203ENST00000398258 GRIN3BO60391 1043 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 SLPIP03973 132 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 TGM1P22735 817 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 TAGLNQ01995 201 aaKnown RBP4.62□□□□□ -1.67
CD47-203ENST00000398258 HNRNPA0Q13151 305 aaKnown RBP4.62□□□□□ -1.67
CD47-203ENST00000398258 VWA3BQ502W6 1294 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 SLC6A19Q695T7 634 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 ZPBP2Q6X784 338 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 MCATQ8IVS2 390 aaKnown RBP4.62□□□□□ -1.67
CD47-203ENST00000398258 Q8N1X5 172 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 FBF1Q8TES7 1133 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 MRRFQ96E11 262 aaKnown RBP4.62□□□□□ -1.67
CD47-203ENST00000398258 CRTAC1Q9NQ79 661 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
CD47-203ENST00000398258 TMEM82A0PJX8 343 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 LDHBP07195 334 aaKnown RBP4.61□□□□□ -1.67
CD47-203ENST00000398258 IGFBP6P24592 240 aaPredicted RBP4.61□□□□□ -1.67
CD47-203ENST00000398258 LIMS1P48059 325 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 CEBPAP49715 358 aaPredicted RBP4.61□□□□□ -1.67
CD47-203ENST00000398258 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 HHIPL1Q96JK4 782 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 CORINQ9Y5Q5 1042 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 TACC3Q9Y6A5 838 aa4.61□□□□□ -1.67
CD47-203ENST00000398258 PLA2G1BP04054 148 aaKnown RBP4.6□□□□□ -1.67
CD47-203ENST00000398258 KCNC1P48547 511 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 DAB2P98082 770 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 ZNF827Q17R98 1081 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 LDLRAD1Q5T700 205 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 ALG1LQ6GMV1 187 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 TMC6Q7Z403 805 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 TMC4Q7Z404 712 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 USHBP1Q8N6Y0 703 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 MAP6Q96JE9 813 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 FRMD6Q96NE9 622 aa4.6□□□□□ -1.67
CD47-203ENST00000398258 BUB1BO60566 1050 aaPredicted RBP4.59□□□□□ -1.67
CD47-203ENST00000398258 PNLIPP16233 465 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 ATP2B2Q01814 1243 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 TTBK2Q6IQ55 1244 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 CYB5D2Q8WUJ1 264 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 RNF141Q8WVD5 230 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 RBM15Q96T37 977 aaKnown RBP eCLIP4.59□□□□□ -1.67
CD47-203ENST00000398258 SPATA25Q9BR10 227 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 CNOT11Q9UKZ1 510 aaKnown RBP4.59□□□□□ -1.67
CD47-203ENST00000398258 KCNH3Q9ULD8 1083 aa4.59□□□□□ -1.67
CD47-203ENST00000398258 RECKO95980 971 aa4.58□□□□□ -1.68
CD47-203ENST00000398258 FBLN1P23142 703 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms