RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 BMP3P12645 472 aa29.85■■■□□ 2.37
TSPAN4-207ENST00000397411 PRMT2P55345 433 aa29.85■■■□□ 2.37
TSPAN4-207ENST00000397411 CAP1Q01518 475 aa29.85■■■□□ 2.37
TSPAN4-207ENST00000397411 UBAC1Q9BSL1 405 aa29.85■■■□□ 2.37
TSPAN4-207ENST00000397411 CTDP1Q9Y5B0 961 aaPredicted RBP29.85■■■□□ 2.37
TSPAN4-207ENST00000397411 E7EWF7 191 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 MCCP23508 829 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 CTGFP29279 349 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 SLC1A4P43007 532 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 IKQ13123 557 aaPredicted RBP29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 Q3C1V9 767 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 LBX2Q6XYB7 198 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 MB21D1Q8N884 522 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 NCOA7Q8NI08 942 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 ZSCAN10Q96SZ4 725 aaPredicted RBP29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 TMEM47Q9BQJ4 181 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 FBXO28Q9NVF7 368 aa29.84■■■□□ 2.37
TSPAN4-207ENST00000397411 MYPNQ86TC9 1320 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 PLS1Q14651 629 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 RNF20Q5VTR2 975 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 ATG4CQ96DT6 458 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 ABHD8Q96I13 439 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 SLF1Q9BQI6 1058 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 SRRDQ9UH36 339 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 FEM1BQ9UK73 627 aa29.83■■■□□ 2.37
TSPAN4-207ENST00000397411 ZSWIM8A7E2V4 1837 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 WDR78Q5VTH9 848 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 DGKHQ86XP1 1220 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 NKX2-3Q8TAU0 364 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 RAET1EQ8TD07 263 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 BTBD7Q9P203 1132 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 PPP1R9AQ9ULJ8 1098 aa29.82■■■□□ 2.36
TSPAN4-207ENST00000397411 SLC27A2O14975 620 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 MAPK4P31152 587 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 NOVP48745 357 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 CCDC96Q2M329 555 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 CREB3L3Q68CJ9 461 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 PRPF38AQ8NAV1 312 aaKnown RBP29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 KIFC2Q96AC6 838 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 GMCL1Q96IK5 515 aa29.81■■■□□ 2.36
TSPAN4-207ENST00000397411 TMEM232C9JQI7 657 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 CNMDO75829 334 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 RCSD1Q6JBY9 416 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 CHURC1Q8WUH1 139 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 KAT14Q9H8E8 782 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 HPS5Q9UPZ3 1129 aa29.8■■■□□ 2.36
TSPAN4-207ENST00000397411 ERICH2A1L162 156 aa29.79■■■□□ 2.36
TSPAN4-207ENST00000397411 NECTIN1Q15223 517 aa29.79■■■□□ 2.36
TSPAN4-207ENST00000397411 POTEEQ6S8J3 1075 aa29.79■■■□□ 2.36
TSPAN4-207ENST00000397411 DCAF4Q8WV16 495 aa29.79■■■□□ 2.36
TSPAN4-207ENST00000397411 PTCH2Q9Y6C5 1203 aa29.79■■■□□ 2.36
TSPAN4-207ENST00000397411 TNKSO95271 1327 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 CCDC85CA6NKD9 419 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 ZBED4O75132 1171 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 REC8O95072 547 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 PRKCZQ05513 592 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 KCTD1Q719H9 257 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 CYB5R4Q7L1T6 521 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 TAF6LQ9Y6J9 622 aa29.78■■■□□ 2.36
TSPAN4-207ENST00000397411 VWA5AO00534 786 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 SART3Q15020 963 aaKnown RBP29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 IFIT1BQ5T764 474 aaKnown RBP29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 FAM160B2Q86V87 743 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 SPATC1LQ9H0A9 340 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 PORCNQ9H237 461 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 GABRQQ9UN88 632 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 RLFQ13129 1914 aa29.77■■■□□ 2.36
TSPAN4-207ENST00000397411 DOCK3Q8IZD9 2030 aa29.76■■■□□ 2.36
TSPAN4-207ENST00000397411 IFIT3O14879 490 aaKnown RBP29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 STAT2P52630 851 aa29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 STOX1Q6ZVD7 989 aa29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 PLEKHH3Q7Z736 793 aa29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 ENAHQ8N8S7 591 aaPredicted RBP29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 IVNS1ABPQ9Y6Y0 642 aa29.76■■■□□ 2.35
TSPAN4-207ENST00000397411 CAPN15O75808 1086 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 ZKSCAN1P17029 563 aaPredicted RBP29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 SLC4A3P48751 1232 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 FLT3LGP49771 235 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 SLC9C1Q4G0N8 1177 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 NBPF11Q86T75 865 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 NCAPG2Q86XI2 1143 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 ANKS1AQ92625 1134 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 MOV10L1Q9BXT6 1211 aaKnown RBP29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 GPCPD1Q9NPB8 672 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 ADAMTS5Q9UNA0 930 aa29.75■■■□□ 2.35
TSPAN4-207ENST00000397411 PARP14Q460N5 1801 aa29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 TMEM132BQ14DG7 1078 aa29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 CHST3Q7LGC8 479 aa29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 GPR142Q7Z601 462 aa29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 PNMA1Q8ND90 353 aa29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 BIN2Q9UBW5 565 aaPredicted RBP29.74■■■□□ 2.35
TSPAN4-207ENST00000397411 FRMPD2Q68DX3 1309 aaPredicted RBP29.73■■■□□ 2.35
TSPAN4-207ENST00000397411 STAT3P40763 770 aa29.73■■■□□ 2.35
TSPAN4-207ENST00000397411 NUDT12Q9BQG2 462 aa29.73■■■□□ 2.35
TSPAN4-207ENST00000397411 SLC25A27O95847 323 aa29.72■■■□□ 2.35
TSPAN4-207ENST00000397411 FDX1P10109 184 aa29.72■■■□□ 2.35
TSPAN4-207ENST00000397411 WTAPQ15007 396 aa29.72■■■□□ 2.35
TSPAN4-207ENST00000397411 CPXCR1Q8N123 301 aa29.72■■■□□ 2.35
TSPAN4-207ENST00000397411 MROH8Q9H579 483 aa29.72■■■□□ 2.35
TSPAN4-207ENST00000397411 COL11A1P12107 1806 aaPredicted RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms