RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-207ENST00000397200 LRSAM1Q6UWE0 723 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-207ENST00000397200 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 FEZ1Q99689 392 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 SYNPO2Q9UMS6 1093 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 ZBTB43O43298 467 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 DDAH1O94760 285 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 ECE1P42892 770 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 NUP133Q8WUM0 1156 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 WDR18Q9BV38 432 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 MTMR7Q9Y216 660 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
CAPN3-207ENST00000397200 A0A1W2PRG0 241 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 RAD21O60216 631 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 CALM1P0DP23 149 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 CALM2P0DP24 149 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 CALM3P0DP25 149 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 KRT85P78386 507 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 PPATQ06203 517 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 RAB11FIP4Q86YS3 637 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 ZNF280CQ8ND82 737 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 GOPCQ9HD26 462 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 KIF3AQ9Y496 699 aa17.27■□□□□ 0.36
CAPN3-207ENST00000397200 SPDYE5A6NIY4 337 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 USP17L10C9JJH3 530 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 FIBPO43427 364 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.35
CAPN3-207ENST00000397200 RCAN1P53805 252 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 HUNKP57058 714 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 TROAPQ12815 778 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 SPP2Q13103 211 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 OTUD5Q96G74 571 aa17.26■□□□□ 0.35
CAPN3-207ENST00000397200 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 RXRAP19793 462 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
CAPN3-207ENST00000397200 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
CAPN3-207ENST00000397200 HPS5Q9UPZ3 1129 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 NID2Q14112 1375 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 TMEM88BA6NKF7 163 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 F5H6K3 240 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 USP14P54578 494 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 KLRC3Q07444 240 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 PPIL2Q13356 520 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 MTMR2Q13614 643 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 SLFN13Q68D06 897 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 CCDC144CPQ8IYA2 1237 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
CAPN3-207ENST00000397200 OPTNQ96CV9 577 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
CAPN3-207ENST00000397200 SYCE3A1L190 88 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 BACE1P56817 501 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 CCT2P78371 535 aaKnown RBP17.24■□□□□ 0.35
CAPN3-207ENST00000397200 RTN1Q16799 776 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 NCOA5Q9HCD5 579 aaKnown RBP17.24■□□□□ 0.35
CAPN3-207ENST00000397200 PTPRFP10586 1907 aa17.24■□□□□ 0.35
CAPN3-207ENST00000397200 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 NDUFB10O96000 172 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 PDHBP11177 359 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 KIF5BP33176 963 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 GRM4Q14833 912 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 USP17L2Q6R6M4 530 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 SAPCD2Q86UD0 394 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 DCAF4Q8WV16 495 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 SCAND2PQ9GZW5 306 aaPredicted RBP17.23■□□□□ 0.35
CAPN3-207ENST00000397200 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
CAPN3-207ENST00000397200 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
CAPN3-207ENST00000397200 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 CXCL11O14625 94 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 IRF6O14896 467 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
CAPN3-207ENST00000397200 SNHG28P0DPA3 235 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 SLC1A4P43007 532 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
CAPN3-207ENST00000397200 CCDC96Q2M329 555 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 RASGRP2Q7LDG7 609 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 LPAR1Q92633 364 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 WNK4Q96J92 1243 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
CAPN3-207ENST00000397200 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms