RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM83BQ5T0W9 1011 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 SHCBP1Q8NEM2 672 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 ATG4CQ96DT6 458 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 RNF208Q9H0X6 261 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 IVNS1ABPQ9Y6Y0 642 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 PDE4DIPQ5VU43 2346 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 SLC15A5A6NIM6 579 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 RANBP6O60518 1105 aaKnown RBP17.23■□□□□ 0.35
SEC13-208ENST00000397109 HMGCRP04035 888 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 GJB1P08034 283 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 GSPT1P15170 499 aaKnown RBP17.23■□□□□ 0.35
SEC13-208ENST00000397109 CAPN2P17655 700 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 CYP2B6P20813 491 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 RGS2P41220 211 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 MORN1Q5T089 497 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 GMCL1P1Q8NEA9 526 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 USP6NLQ92738 828 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 ADAMTS5Q9UNA0 930 aa17.23■□□□□ 0.35
SEC13-208ENST00000397109 STRNO43815 780 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 PTPREP23469 700 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
SEC13-208ENST00000397109 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 MOV10L1Q9BXT6 1211 aaKnown RBP17.22■□□□□ 0.35
SEC13-208ENST00000397109 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
SEC13-208ENST00000397109 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
SEC13-208ENST00000397109 PLXNB2O15031 1838 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 ZNF213O14771 459 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 SLC25A27O95847 323 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 NT5C2P49902 561 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 PLS1Q14651 629 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 MROH8Q9H579 483 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
SEC13-208ENST00000397109 VWA5AO00534 786 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 GJA8P48165 433 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 HAND2P61296 217 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
SEC13-208ENST00000397109 SLFN13Q68D06 897 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 LRRC47Q8N1G4 583 aaKnown RBP17.2■□□□□ 0.34
SEC13-208ENST00000397109 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
SEC13-208ENST00000397109 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
SEC13-208ENST00000397109 APBA2Q99767 749 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 SLF1Q9BQI6 1058 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 STX8Q9UNK0 236 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 RAD50Q92878 1312 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
SEC13-208ENST00000397109 A0A0G2JMZ2 1700 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
SEC13-208ENST00000397109 ERCC3P19447 782 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 COPB2P35606 906 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 GRB14Q14449 540 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 TMEM132BQ14DG7 1078 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 TRIB2Q92519 343 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 IL17RBQ9NRM6 502 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
SEC13-208ENST00000397109 RPTORQ8N122 1335 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 HOXC6P09630 235 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 BMP3P12645 472 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 STAT3P40763 770 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 NOVP48745 357 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 NCAPG2Q86XI2 1143 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 HMX1Q9NP08 348 aaPredicted RBP17.18■□□□□ 0.34
SEC13-208ENST00000397109 SLC5A4Q9NY91 659 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
SEC13-208ENST00000397109 ZBED4O75132 1171 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 SGPL1O95470 568 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 FDX1P10109 184 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 CHMLP26374 656 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
SEC13-208ENST00000397109 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 RIOX2Q8IUF8 465 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
SEC13-208ENST00000397109 CHURC1Q8WUH1 139 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 ESR2Q92731 530 aa17.18■□□□□ 0.34
SEC13-208ENST00000397109 PAK6Q9NQU5 681 aaPredicted RBP17.18■□□□□ 0.34
SEC13-208ENST00000397109 NMT2O60551 498 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 SLC1A4P43007 532 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 DPP9Q86TI2 863 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 FAM160B2Q86V87 743 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 TBC1D10CQ8IV04 446 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 REPS2Q8NFH8 660 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 TTC14Q96N46 770 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 NBPF3Q9H094 633 aa17.17■□□□□ 0.34
SEC13-208ENST00000397109 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.341e-7■■□□□ 12.5
SEC13-208ENST00000397109 ZNF214Q9UL59 606 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms