RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TAF1P21675 1872 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 STARD3NLO95772 234 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 COPB1P53618 953 aaKnown RBP15.76■□□□□ 0.11
NUP98-204ENST00000397004 HERVK_113P62684 666 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 TTC26A0AVF1 554 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 KRT2P35908 639 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 PRCPP42785 496 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 SLC20A2Q08357 652 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 MYO1CO00159 1063 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 SYF2O95926 243 aaKnown RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 MYBL2P10244 700 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 CEP112Q8N8E3 955 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 CEP131Q9UPN4 1083 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 SEMA3EO15041 775 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 N4BP3O15049 544 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 ATP1A1P05023 1023 aaKnown RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 RIN2Q8WYP3 895 aaPredicted RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 NAPGQ99747 312 aaPredicted RBP15.75■□□□□ 0.11
NUP98-204ENST00000397004 DUSP10Q9Y6W6 482 aa15.75■□□□□ 0.11
NUP98-204ENST00000397004 FAM205AQ6ZU69 1335 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 CNTNAP5Q8WYK1 1306 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 PP2D1A8MPX8 630 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 KRT9P35527 623 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 ACTN2P35609 894 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 KLK7P49862 253 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 TTC38Q5R3I4 469 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 HDXQ7Z353 690 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 CNGA4Q8IV77 575 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 UBAC1Q9BSL1 405 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 ZMYND10O75800 440 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 SLC5A1P13866 664 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 TRAPPC11Q7Z392 1133 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
NUP98-204ENST00000397004 HINFPQ9BQA5 517 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 ANKRD65E5RJM6 399 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 CYP7A1P22680 504 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 KCNJ12Q14500 433 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 NELFBQ8WX92 580 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 GDAP1L1Q96MZ0 367 aa15.74■□□□□ 0.11
NUP98-204ENST00000397004 CCDC196A0A1B0GTZ2 297 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 PDE2AO00408 941 aaPredicted RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 PIK3AP1Q6ZUJ8 805 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 IQUBQ8NA54 791 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 GOLGA5Q8TBA6 731 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 LACRTQ9GZZ8 138 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 RWDD2AQ9UIY3 292 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 MYO6Q9UM54 1294 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 BCL9O00512 1426 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 MCM7P33993 719 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 GYG1P46976 350 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 RCAN1P53805 252 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 GSPT2Q8IYD1 628 aaKnown RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 GUCA1BQ9UMX6 200 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 TTF2Q9UNY4 1162 aaKnown RBP15.73■□□□□ 0.11
NUP98-204ENST00000397004 ERICH2A1L162 156 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 NDUFA10O95299 355 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 TYW1BQ6NUM6 668 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 SRLQ86TD4 932 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 TMTC1Q8IUR5 882 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
NUP98-204ENST00000397004 ZNF185O15231 689 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 SLC35G1Q2M3R5 365 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 TMTC2Q8N394 836 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 LRRC31Q6UY01 552 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 C10orf67Q8IYJ2 551 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 NACAP1Q9BZK3 213 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 AGPAT5Q9NUQ2 364 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 ABCF2Q9UG63 623 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 PRPF6O94906 941 aaKnown RBP15.72■□□□□ 0.11
NUP98-204ENST00000397004 CHRNDQ07001 517 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 RASGRP4Q8TDF6 673 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 MTA3Q9BTC8 594 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 EPN1Q9Y6I3 576 aaPredicted RBP15.72■□□□□ 0.11
NUP98-204ENST00000397004 DLEC1Q9Y238 1755 aa15.72■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE15A4D2H0 777 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE8P0CG41 777 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 GNAT2P19087 354 aa15.71■□□□□ 0.11
NUP98-204ENST00000397004 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms