RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
GAPDH-203ENST00000396858 VCPKMTQ9H867 229 aa16.39■□□□□ 0.21
GAPDH-203ENST00000396858 GPCPD1Q9NPB8 672 aa16.39■□□□□ 0.21
GAPDH-203ENST00000396858 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
GAPDH-203ENST00000396858 IFNAR1P17181 557 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 SLC1A4P43007 532 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 FUT2Q10981 343 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 SPP2Q13103 211 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
GAPDH-203ENST00000396858 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 OTUD5Q96G74 571 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 GMCL1Q96IK5 515 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 ZHX2Q9Y6X8 837 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 STK36Q9NRP7 1315 aa16.38■□□□□ 0.21
GAPDH-203ENST00000396858 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-203ENST00000396858 FKBP1BP68106 108 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
GAPDH-203ENST00000396858 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 LDLRAD1Q5T700 205 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 SMC1BQ8NDV3 1235 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-203ENST00000396858 PASKQ96RG2 1323 aa16.37■□□□□ 0.21
GAPDH-203ENST00000396858 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
GAPDH-203ENST00000396858 DDIT3P35638 169 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 SLC16A2P36021 539 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 GNAQP50148 359 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 HMGCS2P54868 508 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
GAPDH-203ENST00000396858 C2orf69Q8N8R5 385 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-203ENST00000396858 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 PTPRFP10586 1907 aa16.36■□□□□ 0.21
GAPDH-203ENST00000396858 CYTH3O43739 400 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 BMP3P12645 472 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 VCAM1P19320 739 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 BACE1P56817 501 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
GAPDH-203ENST00000396858 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
GAPDH-203ENST00000396858 CST9Q5W186 159 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 ERO1BQ86YB8 467 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
GAPDH-203ENST00000396858 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
GAPDH-203ENST00000396858 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
GAPDH-203ENST00000396858 GJA5P36382 358 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 USP14P54578 494 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 PPIL2Q13356 520 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 PKP1Q13835 747 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 HOMER1Q86YM7 354 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
GAPDH-203ENST00000396858 LPAR1Q92633 364 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 LZTS2Q9BRK4 669 aa16.34■□□□□ 0.21
GAPDH-203ENST00000396858 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
GAPDH-203ENST00000396858 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 IRF6O14896 467 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
GAPDH-203ENST00000396858 PPATQ06203 517 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 SYDE2Q5VT97 1194 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 C12orf42Q96LP6 360 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
GAPDH-203ENST00000396858 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
GAPDH-203ENST00000396858 DEXIO95424 95 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 MYH6P13533 1939 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 STAT2P52630 851 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 HUNKP57058 714 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
GAPDH-203ENST00000396858 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
GAPDH-203ENST00000396858 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.21e-7■■■■□ 26.1
GAPDH-203ENST00000396858 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 PIGSQ96S52 555 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
GAPDH-203ENST00000396858 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
GAPDH-203ENST00000396858 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
GAPDH-203ENST00000396858 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
GAPDH-203ENST00000396858 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
GAPDH-203ENST00000396858 TOMM70O94826 608 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms