RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 ATF2P15336 505 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 IPO11Q9UI26 975 aaKnown RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 ATF7P17544 494 aaPredicted RBP15.33■□□□□ 0.05
COL4A3-202ENST00000396578 BBOF1Q8ND07 529 aa15.33■□□□□ 0.05
COL4A3-202ENST00000396578 BLZF1Q9H2G9 400 aa15.33■□□□□ 0.05
COL4A3-202ENST00000396578 ARMT1Q9H993 441 aa15.33■□□□□ 0.05
COL4A3-202ENST00000396578 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
COL4A3-202ENST00000396578 SPZ1Q9BXG8 430 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 VAMP4O75379 141 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 RPSAP08865 295 aaKnown RBP15.33■□□□□ 0.04
COL4A3-202ENST00000396578 IL9RQ01113 521 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 NELFCDQ8IXH7 590 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 EFCAB13Q8IY85 973 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 ZMAT2Q96NC0 199 aaKnown RBP15.33■□□□□ 0.04
COL4A3-202ENST00000396578 AZI2Q9H6S1 392 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
COL4A3-202ENST00000396578 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 TCP1P17987 556 aaKnown RBP15.33■□□□□ 0.04
COL4A3-202ENST00000396578 CCDC197Q8NCU1 140 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 GPIHBP1Q8IV16 184 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 PASKQ96RG2 1323 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 KIAA1468Q9P260 1216 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 GINS2Q9Y248 185 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
COL4A3-202ENST00000396578 PLCH2O75038 1416 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 NUB1Q9Y5A7 615 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 OTUD6AQ7L8S5 288 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 CCDC124Q96CT7 223 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 CCT5P48643 541 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 RNASELQ05823 741 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 TMTC3Q6ZXV5 915 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 FBLN1P23142 703 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 PDE6CP51160 858 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 USH1GQ495M9 461 aa15.32■□□□□ 0.04
COL4A3-202ENST00000396578 REXO1Q8N1G1 1221 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 PPWD1Q96BP3 646 aaKnown RBP15.32■□□□□ 0.04
COL4A3-202ENST00000396578 PSDA5PKW4 1024 aaPredicted RBP15.31■□□□□ 0.04
COL4A3-202ENST00000396578 BUB1O43683 1085 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 N4BP1O75113 896 aaKnown RBP15.31■□□□□ 0.04
COL4A3-202ENST00000396578 LMNB1P20700 586 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 ECE1P42892 770 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 HACE1Q8IYU2 909 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 PDE11AQ9HCR9 933 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 RNF8O76064 485 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 TRIM37O94972 964 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
COL4A3-202ENST00000396578 PDZD4Q76G19 769 aaPredicted RBP15.31■□□□□ 0.04
COL4A3-202ENST00000396578 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 CDKL2Q92772 493 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 DESI2Q9BSY9 194 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 NOC2LQ9Y3T9 749 aaKnown RBP15.31■□□□□ 0.04
COL4A3-202ENST00000396578 IFT88Q13099 833 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 CADPS2Q86UW7 1296 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 NRBF2Q96F24 287 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 CCDC68Q9H2F9 335 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 NR1I2O75469 434 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 IDI1Q13907 227 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 TMTC4Q5T4D3 741 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 ST7Q9NRC1 585 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 GOLGA8CPA6NN73 597 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 SLC1A4P43007 532 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 LRMPQ12912 555 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 SCYL3Q8IZE3 742 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 FLT4P35916 1363 aa15.31■□□□□ 0.04
COL4A3-202ENST00000396578 PARP3Q9Y6F1 533 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 ZNF500O60304 480 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 VPS41P49754 854 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 FBXO41Q8TF61 875 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 INTS9Q9NV88 658 aaKnown RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 POMGNT1Q8WZA1 660 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 SPDYE16A6NNV3 312 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 M0QZ92 97 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-202ENST00000396578 OATP04181 439 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 INHBAP08476 426 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 ASPHQ12797 758 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 IL1RL1Q01638 556 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 MIS12Q9H081 205 aa15.3■□□□□ 0.04
COL4A3-202ENST00000396578 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms