RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ZSCAN25Q6NSZ9 544 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 C16orf86Q6ZW13 317 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 SPICE1Q8N0Z3 855 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 SLC44A5Q8NCS7 719 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 BADQ92934 168 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 TINF2Q9BSI4 451 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 MBD4O95243 580 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 CYP2D6P10635 497 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 AKR1B1P15121 316 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 STAT3P40763 770 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 PRAMEF19Q5SWL8 479 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 ANO1Q5XXA6 986 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 DYNLL2Q96FJ2 89 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 COL25A1Q9BXS0 654 aaPredicted RBP21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 SEMA6BQ9H3T3 888 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 ROBO3Q96MS0 1386 aa21.06■□□□□ 0.96
EXOSC3-202ENST00000396521 USP17L12C9JPN9 530 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 USP17L21D6R901 530 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 TLE2Q04725 743 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 FAM47AQ5JRC9 791 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 FAM161BQ96MY7 647 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 CDX2Q99626 313 aaPredicted RBP21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 TSEN34Q9BSV6 310 aaKnown RBP21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 PPP1R9AQ9ULJ8 1098 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 CNPY2Q9Y2B0 182 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 FRMPD3Q5JV73 1810 aa21.05■□□□□ 0.96
EXOSC3-202ENST00000396521 VWA5AO00534 786 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 EEF2P13639 858 aaKnown RBP21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 AKR1A1P14550 325 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 EVX2Q03828 476 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 ZNF792Q3KQV3 632 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 PANK1Q8TE04 598 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 TOX2Q96NM4 488 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 HAUS7Q99871 368 aa21.04■□□□□ 0.96
EXOSC3-202ENST00000396521 KIAA0355O15063 1070 aa21.03■□□□□ 0.96
EXOSC3-202ENST00000396521 PRKAB2O43741 272 aa21.03■□□□□ 0.96
EXOSC3-202ENST00000396521 CLTBP09497 229 aa21.03■□□□□ 0.96
EXOSC3-202ENST00000396521 C9orf50Q5SZB4 431 aa21.03■□□□□ 0.96
EXOSC3-202ENST00000396521 NUP133Q8WUM0 1156 aa21.03■□□□□ 0.96
EXOSC3-202ENST00000396521 A0A0G2JMZ2 1700 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 TRIM43BA6NCK2 446 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 RAG1P15918 1043 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 TRIM43Q96BQ3 446 aaPredicted RBP21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 TEX13BQ9BXU2 312 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 BOLA2Q9H3K6 86 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 ZBTB40Q9NUA8 1239 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 ARPP21Q9UBL0 812 aaPredicted RBP21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 ZNF214Q9UL59 606 aaPredicted RBP21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 NAV1Q8NEY1 1877 aa21.02■□□□□ 0.96
EXOSC3-202ENST00000396521 MOXD2PA6NHM9 499 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 APBB1O00213 710 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 GIMAP6Q6P9H5 292 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 ANKRD33Q7Z3H0 272 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 MAFAQ8NHW3 353 aaPredicted RBP21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 SLC4A4Q9Y6R1 1079 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 ZBED9Q6R2W3 1325 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 SYNGAP1Q96PV0 1343 aa21.01■□□□□ 0.95
EXOSC3-202ENST00000396521 RLFQ13129 1914 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 DCDC2CA8MYV0 355 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 PGK2P07205 417 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 ZNF865P0CJ78 1059 aaPredicted RBP21■□□□□ 0.95
EXOSC3-202ENST00000396521 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 CLEC10AQ8IUN9 316 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 RNPC3Q96LT9 517 aaKnown RBP21■□□□□ 0.95
EXOSC3-202ENST00000396521 SLF1Q9BQI6 1058 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 ZNF287Q9HBT7 754 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 FBXO28Q9NVF7 368 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 FAM184BQ9ULE4 1060 aa21■□□□□ 0.95
EXOSC3-202ENST00000396521 A0A1W2PQ45 241 aaPredicted RBP20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 A0A1W2PQY0 241 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 ATP2A1O14983 1001 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 PGK1P00558 417 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 SBK1Q52WX2 424 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 CTR9Q6PD62 1173 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 CCDC174Q6PII3 467 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 MAMDC4Q6UXC1 1216 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 ZNF467Q7Z7K2 595 aaPredicted RBP20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 DDX11Q96FC9 970 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 TMEM39AQ9NV64 488 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 SYNPO2Q9UMS6 1093 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 MROH7Q68CQ1 1323 aa20.99■□□□□ 0.95
EXOSC3-202ENST00000396521 FPGSQ05932 587 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 FAM83BQ5T0W9 1011 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 SIRT2Q8IXJ6 389 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 REPS2Q8NFH8 660 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 SYMPKQ92797 1274 aaKnown RBP20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 STARD7Q9NQZ5 370 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 NYAP2Q9P242 653 aa20.98■□□□□ 0.95
EXOSC3-202ENST00000396521 CYP2D7A0A087X1C5 515 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 RAD21O60216 631 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 PQBP1O60828 265 aaKnown RBP20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 ADAMTS4O75173 837 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 DUSP11O75319 330 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms