RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 USP17L15C9J2P7 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L13C9JLJ4 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L11C9JVI0 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L18D6R9N7 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L22D6RA61 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L17D6RBQ6 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L19D6RCP7 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L20D6RJB6 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 FKTNO75072 461 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 TAL1P17542 331 aaPredicted RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 USP17L24Q0WX57 530 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 CATSPERGQ6ZRH7 1159 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.512e-10■□□□□ 10.8
THUMPD1-202ENST00000396083 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 BRPF3Q9ULD4 1205 aa11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
THUMPD1-202ENST00000396083 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 PSMC4P43686 418 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 ANTXR2P58335 489 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 IFIT1BQ5T764 474 aaKnown RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 PORCNQ9H237 461 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 PRC1O43663 620 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 HOXA7P31268 230 aaPredicted RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 LACTBP83111 547 aaPredicted RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 COG2Q14746 738 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 PIBF1Q8WXW3 757 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 LPAR1Q92633 364 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 KAT14Q9H8E8 782 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 EFCC1Q9HA90 598 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 LOC285556D6RIA3 1793 aa11.86□□□□□ -0.51
THUMPD1-202ENST00000396083 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 GSE1Q14687 1217 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 UBA5Q9GZZ9 404 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 ERICH2A1L162 156 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 BMP3P12645 472 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 FGD1P98174 961 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 NEK1Q96PY6 1258 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 USP26Q9BXU7 913 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
THUMPD1-202ENST00000396083 DHX16O60231 1041 aaKnown RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 BCRP11274 1271 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 MKL1Q969V6 931 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 LAMA2P24043 3122 aaKnown RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 DTNBO60941 627 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 PDHBP11177 359 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 HSPA4P34932 840 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 ERVK-24P63145 666 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 WTAPQ15007 396 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 CCDC174Q6PII3 467 aa11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
THUMPD1-202ENST00000396083 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 MCM5P33992 734 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 STAT2P52630 851 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 KIF22Q14807 665 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 ADGRA2Q96PE1 1338 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 SART3Q15020 963 aaKnown RBP11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 SEC23AQ15436 765 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
THUMPD1-202ENST00000396083 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms