RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 RBM10P98175 930 aaKnown RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 KLRC3Q07444 240 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 GALNT17Q6IS24 598 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 CCDC12Q8WUD4 166 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 NUP133Q8WUM0 1156 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 GLT8D2Q9H1C3 349 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 GBA2Q9HCG7 927 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 CHMP5Q9NZZ3 219 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 FEM1BQ9UK73 627 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 SLC45A1Q9Y2W3 748 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 CNTNAP5Q8WYK1 1306 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 TOMM70O94826 608 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
CCR9-203ENST00000395963 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
CCR9-203ENST00000395963 BMP3P12645 472 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 INPP5BP32019 993 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 SLC1A4P43007 532 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 FUT2Q10981 343 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCR9-203ENST00000395963 VGLL4Q14135 290 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 MCTP2Q6DN12 878 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 MTMR8Q96EF0 704 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 ZCCHC17Q9NP64 241 aaKnown RBP10.23□□□□□ -0.77
CCR9-203ENST00000395963 AFG3L2Q9Y4W6 797 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 KIF3CO14782 793 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 NDUFB10O96000 172 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 TPM2P07951 284 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 NBPF11Q86T75 865 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 CCDC148Q8NFR7 591 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 FEZ1Q99689 392 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 TMOD4Q9NZQ9 345 aa10.23□□□□□ -0.77
CCR9-203ENST00000395963 NAP1L2Q9ULW6 460 aaPredicted RBP10.23□□□□□ -0.77
CCR9-203ENST00000395963 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 GJB2P29033 226 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 CDC27P30260 824 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 MAP1SQ66K74 1059 aaPredicted RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 NOL8Q76FK4 1167 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 ORC3Q9UBD5 711 aaPredicted RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 ATP6V1DQ9Y5K8 247 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 ESYT2A0FGR8 921 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 CTDNEP1O95476 244 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 CCT2P78371 535 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 JAG1P78504 1218 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 STK3Q13188 491 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 LRRC47Q8N1G4 583 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 NECAB1Q8N987 351 aa10.22□□□□□ -0.77
CCR9-203ENST00000395963 RRP36Q96EU6 259 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
CCR9-203ENST00000395963 A0A0G2JLL6 359 aaPredicted RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
CCR9-203ENST00000395963 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 STAT2P52630 851 aa10.21□□□□□ -0.77
CCR9-203ENST00000395963 OAZ1P54368 228 aa10.21□□□□□ -0.77
CCR9-203ENST00000395963 TRIM29Q14134 588 aa10.21□□□□□ -0.77
CCR9-203ENST00000395963 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 PFKFB3Q16875 520 aaPredicted RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 PRRT2Q7Z6L0 340 aaPredicted RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.77
CCR9-203ENST00000395963 CALML3P27482 149 aa10.21□□□□□ -0.78
CCR9-203ENST00000395963 CCDC96Q2M329 555 aa10.21□□□□□ -0.78
CCR9-203ENST00000395963 ZSCAN16Q9H4T2 348 aaPredicted RBP10.21□□□□□ -0.78
CCR9-203ENST00000395963 PTPRFP10586 1907 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 A0A0G2JMZ2 1700 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 SCG2P13521 617 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 HOXA7P31268 230 aaPredicted RBP10.2□□□□□ -0.78
CCR9-203ENST00000395963 COPB2P35606 906 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 ATP2B2Q01814 1243 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 LBX2Q6XYB7 198 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
CCR9-203ENST00000395963 MB21D1Q8N884 522 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 ZKSCAN4Q969J2 545 aaPredicted RBP10.2□□□□□ -0.78
CCR9-203ENST00000395963 MYL10Q9BUA6 226 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 NCOA5Q9HCD5 579 aaKnown RBP10.2□□□□□ -0.78
CCR9-203ENST00000395963 ZHX2Q9Y6X8 837 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 CELF2O95319 508 aaKnown RBP10.2□□□□□ -0.78
CCR9-203ENST00000395963 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 GTF2A2P52657 109 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 SNAPC2Q13487 334 aa10.2□□□□□ -0.78
CCR9-203ENST00000395963 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms