RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MECOMQ03112 1051 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 ITPK1Q13572 414 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 CASP8Q14790 479 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 KIAA0753Q2KHM9 967 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 SARM1Q6SZW1 724 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 FAM228AQ86W67 206 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 SMYD1Q8NB12 490 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 MBD4O95243 580 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 CUL4BQ13620 913 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 GALNT17Q6IS24 598 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 CYB5D1Q6P9G0 228 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 CORO1BQ9BR76 489 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 BRD8Q9H0E9 1235 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 MYO1AQ9UBC5 1043 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 RPAP1Q9BWH6 1393 aaPredicted RBP9.97□□□□□ -0.81
MSH5-205ENST00000395853 CNTNAP4Q9C0A0 1308 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 PNMA6EA0A0J9YXQ4 647 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 INHBCP55103 352 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 CUL4AQ13619 759 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
MSH5-205ENST00000395853 ARHGAP27Q6ZUM4 889 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 CCDC13Q8IYE1 715 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 ZCWPW1Q9H0M4 648 aa9.97□□□□□ -0.81
MSH5-205ENST00000395853 TIMM44O43615 452 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 PARP1P09874 1014 aaKnown RBP9.96□□□□□ -0.81
MSH5-205ENST00000395853 LINGO3P0C6S8 592 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 PHKG2P15735 406 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 TTC22Q5TAA0 569 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 CCDC65Q8IXS2 484 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 KAT14Q9H8E8 782 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 RABL2AQ9UBK7 228 aaPredicted RBP9.96□□□□□ -0.81
MSH5-205ENST00000395853 USP16Q9Y5T5 823 aa9.96□□□□□ -0.81
MSH5-205ENST00000395853 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
MSH5-205ENST00000395853 GOLGA6L7A0A1B0GV03 622 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 ERVV-2B6SEH9 535 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.96□□□□□ -0.82
MSH5-205ENST00000395853 HMMRO75330 724 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 GNAI3P08754 354 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 ZNF165P49910 485 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 IFFO1Q0D2I5 559 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 HOOK3Q86VS8 718 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 TTC30AQ86WT1 665 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 KCTD17Q8N5Z5 321 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 RETREG1Q9H6L5 497 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 NMRK2Q9NPI5 230 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
MSH5-205ENST00000395853 TPX2Q9ULW0 747 aaKnown RBP9.96□□□□□ -0.82
MSH5-205ENST00000395853 TNRC6CQ9HCJ0 1690 aaKnown RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 COL5A3P25940 1745 aaPredicted RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 FIBPO43427 364 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 PRPF6O94906 941 aaKnown RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 DPEP1P16444 411 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 ATP8B2P98198 1209 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 BHMTQ93088 406 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 JAKMIP2Q96AA8 810 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 AATFQ9NY61 560 aaKnown RBP eCLIP9.95□□□□□ -0.82
MSH5-205ENST00000395853 UBAP1Q9NZ09 502 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 RAB21Q9UL25 225 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 SIPA1L3O60292 1781 aaPredicted RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 CDHR2Q9BYE9 1310 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 PI4KAP2A4QPH2 592 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 TMEM221A6NGB7 291 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 EIF3HO15372 352 aaKnown RBP eCLIP9.95□□□□□ -0.82
MSH5-205ENST00000395853 ATP5JP18859 108 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
MSH5-205ENST00000395853 SEPT14Q6ZU15 432 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 SLF2Q8IX21 1173 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 CACTIN-AS1Q8N1I8 211 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 PI4KAP1Q8N8J0 262 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 SPIRE2Q8WWL2 714 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 MPHOSPH8Q99549 860 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 WWC3Q9ULE0 1092 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 SAMM50Q9Y512 469 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 N6AMT1Q9Y5N5 214 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 CEP350Q5VT06 3117 aa9.95□□□□□ -0.82
MSH5-205ENST00000395853 BECN2A8MW95 431 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 HOXB7P09629 217 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 GYS1P13807 737 aa9.94□□□□□ -0.82
MSH5-205ENST00000395853 DYNC1I2Q13409 638 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms