RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 BMP3P12645 472 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 FKBP1BP68106 108 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 FUT2Q10981 343 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 MAP3K11Q16584 847 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 SHROOM1Q2M3G4 852 aaPredicted RBP15.83■□□□□ 0.12
VAPB-202ENST00000395802 STAG2Q8N3U4 1231 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 RRP36Q96EU6 259 aaKnown RBP15.83■□□□□ 0.12
VAPB-202ENST00000395802 KIAA1683Q9H0B3 1180 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 ZSCAN16Q9H4T2 348 aaPredicted RBP15.83■□□□□ 0.12
VAPB-202ENST00000395802 ISY1Q9ULR0 285 aaKnown RBP15.83■□□□□ 0.12
VAPB-202ENST00000395802 ZDHHC9Q9Y397 364 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 CNTNAP5Q8WYK1 1306 aa15.83■□□□□ 0.12
VAPB-202ENST00000395802 SSC5DA1L4H1 1573 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 A0A1W2PRG0 241 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 C19orf81C9J6K1 198 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 hCG_1984214I3L0E3 225 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 NDUFB10O96000 172 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 GOLGA8HP0CJ92 632 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 PTPRAP18433 802 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 SAFBQ15424 915 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAPB-202ENST00000395802 CLEC17AQ6ZS10 378 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 CMTR1Q8N1G2 835 aaKnown RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 ZNF713Q8N859 430 aaPredicted RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 ZNF280CQ8ND82 737 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 FBXO18Q8NFZ0 1043 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 ZKSCAN4Q969J2 545 aaPredicted RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 GBP4Q96PP9 640 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 ECE1P42892 770 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
VAPB-202ENST00000395802 RIOX1Q9H6W3 641 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 MTMR6Q9Y217 621 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 TCHHQ07283 1943 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 DOCK1Q14185 1865 aa15.82■□□□□ 0.12
VAPB-202ENST00000395802 FRMPD2Q68DX3 1309 aaPredicted RBP15.81■□□□□ 0.12
VAPB-202ENST00000395802 SCG2P13521 617 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 TRAF1Q13077 416 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 PRKG1Q13976 671 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 MAP1SQ66K74 1059 aaPredicted RBP15.81■□□□□ 0.12
VAPB-202ENST00000395802 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 CHURC1Q8WUH1 139 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 SH3GLB2Q9NR46 395 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 ZHX2Q9Y6X8 837 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 ATAD5Q96QE3 1844 aa15.81■□□□□ 0.12
VAPB-202ENST00000395802 WDR46O15213 610 aaKnown RBP15.8■□□□□ 0.12
VAPB-202ENST00000395802 PLA2G6O60733 806 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 PPFIA3O75145 1194 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 F13A1P00488 732 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 STAT2P52630 851 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 BACE1P56817 501 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 IKQ13123 557 aaPredicted RBP15.8■□□□□ 0.12
VAPB-202ENST00000395802 CCDC148Q8NFR7 591 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 ZNF526Q8TF50 670 aaPredicted RBP15.8■□□□□ 0.12
VAPB-202ENST00000395802 BRMS1Q9HCU9 246 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 GPCPD1Q9NPB8 672 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 MCM4P33991 863 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 PPATQ06203 517 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 VGLL4Q14135 290 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
VAPB-202ENST00000395802 KCTD1Q719H9 257 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 FAM160B2Q86V87 743 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 FEM1BQ9UK73 627 aa15.8■□□□□ 0.12
VAPB-202ENST00000395802 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 SPP2Q13103 211 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
VAPB-202ENST00000395802 GALNT17Q6IS24 598 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 BTNL9Q6UXG8 535 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 ERO1BQ86YB8 467 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
VAPB-202ENST00000395802 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
VAPB-202ENST00000395802 TMEM232C9JQI7 657 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 CYTH3O43739 400 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 CALML3P27482 149 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 MTMR2Q13614 643 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 PKN1Q16512 942 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 MCTP1Q6DN14 999 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 ADGRF4Q8IZF3 695 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 SPICE1Q8N0Z3 855 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 ZBTB5O15062 677 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
VAPB-202ENST00000395802 KRT40Q6A162 431 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 BRAPQ7Z569 592 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 VAT1LQ9HCJ6 419 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 SNCAIPQ9Y6H5 919 aa15.78■□□□□ 0.12
VAPB-202ENST00000395802 TRIM75PA6NK02 468 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 MMP1P03956 469 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 SYDE2Q5VT97 1194 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 HOMER1Q86YM7 354 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 C12orf42Q96LP6 360 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 ZNF408Q9H9D4 720 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 BARHL2Q9NY43 387 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms