RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 SPATA31A3Q5VYP0 1347 aa5.71□□□□□ -1.49
FGD4-201ENST00000395740 KIAA1551Q9HCM1 1747 aa5.71□□□□□ -1.49
FGD4-201ENST00000395740 ATAD5Q96QE3 1844 aa5.71□□□□□ -1.49
FGD4-201ENST00000395740 TNS3Q68CZ2 1445 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 A0A1W2PQJ5 194 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 TRIM75PA6NK02 468 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 PRPF3O43395 683 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 KRT86O43790 486 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 OPA1O60313 960 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CALM1P0DP23 149 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CALM2P0DP24 149 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CALM3P0DP25 149 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 ZAP70P43403 619 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 FXR2P51116 673 aaKnown RBP eCLIP5.71□□□□□ -1.5
FGD4-201ENST00000395740 COPB1P53618 953 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 SLC39A6Q13433 755 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 MCM6Q14566 821 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 KARSQ15046 597 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 RTN1Q16799 776 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 GLE1Q53GS7 698 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 HSP90AB3PQ58FF7 597 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 TMEM67Q5HYA8 995 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 ZNF658Q5TYW1 1059 aaPredicted RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 YTHDF3Q7Z739 585 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 TBC1D10CQ8IV04 446 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 EIF1ADQ8N9N8 165 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 C3orf20Q8ND61 904 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 OR8K1Q8NGG5 319 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 PAGE5Q96GU1 130 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 STRBPQ96SI9 672 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 SH3GL2Q99962 352 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 THAP9Q9H5L6 903 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 MAGEF1Q9HAY2 307 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CAPN11Q9UMQ6 739 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 JRKLQ9Y4A0 524 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 SAR1BQ9Y6B6 198 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 NBPF26B4DH59 902 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 TEX33O43247 280 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 NDUFA10O95299 355 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CSB-PGBD3P0DP91 1061 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CASP14P31944 242 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 CYLC1P35663 651 aaPredicted RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 GTF2A1P52655 376 aaPredicted RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 CABP4P57796 275 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 FKBP4Q02790 459 aaKnown RBP eCLIP5.71□□□□□ -1.5
FGD4-201ENST00000395740 LHX8Q68G74 356 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 ISM2Q6H9L7 571 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 NBPF10Q6P3W6 841 aaKnown RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 CCNI2Q6ZMN8 369 aaPredicted RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 B4GALNT4Q76KP1 1039 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 NBPF15Q8N660 670 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 ZBTB38Q8NAP3 1195 aaPredicted RBP5.71□□□□□ -1.5
FGD4-201ENST00000395740 EPC1Q9H2F5 836 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 DEF6Q9H4E7 631 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 LCMT1Q9UIC8 334 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 FAM184BQ9ULE4 1060 aa5.71□□□□□ -1.5
FGD4-201ENST00000395740 NUP98P52948 1817 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 XIRP1Q702N8 1843 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 ABCB11O95342 1321 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 SOS2Q07890 1332 aaPredicted RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 LRRIQ3A6PVS8 624 aaPredicted RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 BTBD18B2RXH4 712 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 ATP5J2-PTCD1G3V325 749 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 PTCD1O75127 700 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 RNF40O75150 1001 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 HNRNPH3P31942 346 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 DNM2P50570 870 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 GSCP56915 257 aaPredicted RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 HAND2P61296 217 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 ERVK-24P63145 666 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 ATP2C1P98194 919 aaPredicted RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 STIM1Q13586 685 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 KRT31Q15323 416 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 E2F4Q16254 413 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 TSR1Q2NL82 804 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 GRIPAP1Q4V328 841 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 TCP11X2Q5H9J9 407 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 EMBQ6PCB8 327 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 CD302Q8IX05 232 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 VGLL2Q8N8G2 317 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 FAM76AQ8TAV0 307 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 DESI2Q9BSY9 194 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 SLC26A6Q9BXS9 759 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 EDEM3Q9BZQ6 932 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 CSRNP2Q9H175 543 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 CUEDC2Q9H467 287 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 LZTFL1Q9NQ48 299 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 PUF60Q9UHX1 559 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 LAMB1P07942 1786 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 ERICH2A1L162 156 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 EBAG9O00559 213 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 IFIT3O14879 490 aaKnown RBP5.7□□□□□ -1.5
FGD4-201ENST00000395740 TRIM66O15016 1216 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 FOXN1O15353 648 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 CYP27B1O15528 508 aa5.7□□□□□ -1.5
FGD4-201ENST00000395740 LCA5LO95447 670 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms