RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 KIAA1683Q9H0B3 1180 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
PTPN20-206ENST00000395722 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 IREB2P48200 963 aaKnown RBP17.53■□□□□ 0.4
PTPN20-206ENST00000395722 KIAA1755Q5JYT7 1200 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 WASF1Q92558 559 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 RIOX1Q9H6W3 641 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 GOPCQ9HD26 462 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
PTPN20-206ENST00000395722 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
PTPN20-206ENST00000395722 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
PTPN20-206ENST00000395722 FRMPD2Q68DX3 1309 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-206ENST00000395722 ZSCAN22P10073 491 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-206ENST00000395722 SLC1A4P43007 532 aa17.52■□□□□ 0.4
PTPN20-206ENST00000395722 PRKG1Q13976 671 aa17.52■□□□□ 0.4
PTPN20-206ENST00000395722 VGLL4Q14135 290 aa17.52■□□□□ 0.4
PTPN20-206ENST00000395722 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
PTPN20-206ENST00000395722 AS3MTQ9HBK9 375 aa17.52■□□□□ 0.4
PTPN20-206ENST00000395722 TRAF5O00463 557 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 BTNL9Q6UXG8 535 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
PTPN20-206ENST00000395722 BMP3P12645 472 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
PTPN20-206ENST00000395722 TTBK2Q6IQ55 1244 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 KCTD1Q719H9 257 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 ZNF280CQ8ND82 737 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 ZNF526Q8TF50 670 aaPredicted RBP17.51■□□□□ 0.39
PTPN20-206ENST00000395722 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
PTPN20-206ENST00000395722 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
PTPN20-206ENST00000395722 LDLRAD1Q5T700 205 aa17.5■□□□□ 0.39
PTPN20-206ENST00000395722 ANKRD13AQ8IZ07 590 aa17.5■□□□□ 0.39
PTPN20-206ENST00000395722 LPAR1Q92633 364 aa17.5■□□□□ 0.39
PTPN20-206ENST00000395722 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
PTPN20-206ENST00000395722 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-206ENST00000395722 UNCXA6NJT0 531 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 PLA2G6O60733 806 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 SCG2P13521 617 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 BACE1P56817 501 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 ARMC9Q7Z3E5 817 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 NUP88Q99567 741 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-206ENST00000395722 FEZ1Q99689 392 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 CSADQ9Y600 493 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 ZHX2Q9Y6X8 837 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 F13A1P00488 732 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 USP14P54578 494 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPN20-206ENST00000395722 SPP2Q13103 211 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 CHADLQ6NUI6 762 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 MOB2Q70IA6 237 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 C12orf42Q96LP6 360 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 GJB4Q9NTQ9 266 aa17.49■□□□□ 0.39
PTPN20-206ENST00000395722 H3BQV1 296 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
PTPN20-206ENST00000395722 FKBP1BP68106 108 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 KRT40Q6A162 431 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 ADGRF4Q8IZF3 695 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
PTPN20-206ENST00000395722 EMILIN3Q9NT22 766 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 C19orf81C9J6K1 198 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 WDR46O15213 610 aaKnown RBP17.48■□□□□ 0.39
PTPN20-206ENST00000395722 RAD21O60216 631 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 FOSBP53539 338 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 MTMR2Q13614 643 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 FAM83BQ5T0W9 1011 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 OTUD7BQ6GQQ9 843 aa17.48■□□□□ 0.39
PTPN20-206ENST00000395722 RRP36Q96EU6 259 aaKnown RBP17.48■□□□□ 0.39
PTPN20-206ENST00000395722 SPDYE5A6NIY4 337 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 SLC16A2P36021 539 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 RESTQ13127 1097 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
PTPN20-206ENST00000395722 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
PTPN20-206ENST00000395722 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 ERO1BQ86YB8 467 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 CLMNQ96JQ2 1002 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 PIGSQ96S52 555 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 SH3GLB2Q9NR46 395 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 PTPRFP10586 1907 aa17.47■□□□□ 0.39
PTPN20-206ENST00000395722 GUCY1B3Q02153 619 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 PPATQ06203 517 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 SYDE2Q5VT97 1194 aa17.46■□□□□ 0.39
PTPN20-206ENST00000395722 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
PTPN20-206ENST00000395722 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms