RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 STAG1Q8WVM7 1258 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 COA7Q96BR5 231 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 ARMC5Q96C12 935 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 RNF41Q9H4P4 317 aaPredicted RBP10.13□□□□□ -0.79
APLF-202ENST00000394342 TXNRD2Q9NNW7 524 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 HOXC10Q9NYD6 342 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 RBPJLQ9UBG7 517 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 CTNNA3Q9UI47 895 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 CEP290O15078 2479 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 ZNF213O14771 459 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
APLF-202ENST00000394342 CNMDO75829 334 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 MAPK4P31152 587 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 HAND2P61296 217 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 CCNA1P78396 465 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 SLC9C1Q4G0N8 1177 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 BMP2KLQ5H9B9 411 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 AKNAD1Q5T1N1 836 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 SPICE1Q8N0Z3 855 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 RAET1EQ8TD07 263 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 PAGR1Q9BTK6 254 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 INCENPQ9NQS7 918 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 CLIP2Q9UDT6 1046 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 TACC3Q9Y6A5 838 aa10.12□□□□□ -0.79
APLF-202ENST00000394342 LCTP09848 1927 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 F5H6K3 240 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 SGSM2O43147 1006 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 FLOT1O75955 427 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 NDUFB10O96000 172 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 NOVP48745 357 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 FLT3LGP49771 235 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 PRKCZQ05513 592 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 KLRC3Q07444 240 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 IRF5Q13568 498 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 IMMTQ16891 758 aaKnown RBP10.11□□□□□ -0.79
APLF-202ENST00000394342 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
APLF-202ENST00000394342 TBC1D10CQ8IV04 446 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 IL25Q9H293 177 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 TOMM22Q9NS69 142 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 GABRQQ9UN88 632 aa10.11□□□□□ -0.79
APLF-202ENST00000394342 RAD21O60216 631 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 GRK4P32298 578 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 Q3C1V9 767 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
APLF-202ENST00000394342 LRRC47Q8N1G4 583 aaKnown RBP10.1□□□□□ -0.79
APLF-202ENST00000394342 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 PXYLP1Q8TE99 480 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 SOCS4Q8WXH5 440 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 PORCNQ9H237 461 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 IL17RBQ9NRM6 502 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 BTBD7Q9P203 1132 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 GJD2Q9UKL4 321 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 PPP1R9AQ9ULJ8 1098 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 ADAMTS5Q9UNA0 930 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
APLF-202ENST00000394342 NEDD4P46934 1319 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 ALPK3Q96L96 1907 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 ADCY3O60266 1144 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 PEX10O60683 326 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 RGS19P49795 217 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 GSE1Q14687 1217 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 SLFN13Q68D06 897 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 GPR142Q7Z601 462 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 SHCBP1Q8NEM2 672 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 SH3TC2Q8TF17 1288 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 ESR2Q92731 530 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 GMCL1Q96IK5 515 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
APLF-202ENST00000394342 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 SLF1Q9BQI6 1058 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 SPATC1LQ9H0A9 340 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 CNNM2Q9H8M5 875 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 CWC22Q9HCG8 908 aaKnown RBP10.09□□□□□ -0.79
APLF-202ENST00000394342 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 PPP4R2Q9NY27 417 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 FEM1BQ9UK73 627 aa10.09□□□□□ -0.79
APLF-202ENST00000394342 KIAA1217Q5T5P2 1943 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 VWA5AO00534 786 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 NMT2O60551 498 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 PLA2G6O60733 806 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
APLF-202ENST00000394342 BMP3P12645 472 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 SOX10P56693 466 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 UBXN2AP68543 259 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 PTH1RQ03431 593 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 MORN1Q5T089 497 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 SKAP1Q86WV1 359 aa10.08□□□□□ -0.8
APLF-202ENST00000394342 TRMT44Q8IYL2 757 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms