RNA–Protein interactions for RNA: ENST00000393829.6

ATP6V0A1-203, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-203ENST00000393829 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ADAM21Q9UKJ8 722 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TULP2O00295 520 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 FGRP09769 529 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 RHOXF2BP0C7M4 288 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CALM1P0DP23 149 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CALM2P0DP24 149 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CALM3P0DP25 149 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 GPS2Q13227 327 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MCM6Q14566 821 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CYP26C1Q6V0L0 522 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 RHOXF2Q9BQY4 288 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PDE11AQ9HCR9 933 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
ATP6V0A1-203ENST00000393829 KCNJ18B7U540 433 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NMT2O60551 498 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 DDAH1O94760 285 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MCM7P33993 719 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 KCNJ12Q14500 433 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ZBTB9Q96C00 473 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NTSR2O95665 410 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 HSPA2P54652 639 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 SPAG1Q07617 926 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 GDAQ9Y2T3 454 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 KRT9P35527 623 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 VSNL1P62760 191 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ZNF658Q5TYW1 1059 aaPredicted RBP16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 HDXQ7Z353 690 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 EXOC4Q96A65 974 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TRERF1Q96PN7 1200 aa16.43■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 AMPD2Q01433 879 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 WHAMMP3Q1A5X7 153 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CHP1Q99653 195 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTAGE15A4D2H0 777 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTAGE8P0CG41 777 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CAPN2P17655 700 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NLRP5P59047 1200 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTAGE6Q86UF2 777 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTAGE4Q8IX94 777 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NOA1Q8NC60 698 aaKnown RBP16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MYO1AQ9UBC5 1043 aa16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 REXO2Q9Y3B8 237 aaKnown RBP16.42■□□□□ 0.22
ATP6V0A1-203ENST00000393829 USP17L12C9JPN9 530 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 USP17L21D6R901 530 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 SCG2P13521 617 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PRCPP42785 496 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TRIM14Q14142 442 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 IRF2BP1Q8IU81 584 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PSD3Q9NYI0 1048 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NIP7Q9Y221 180 aaKnown RBP eCLIP16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ERLIN1O75477 346 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TMEM51Q9NW97 253 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TRIM10Q9UDY6 481 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TAF1P21675 1872 aa16.41■□□□□ 0.22
ATP6V0A1-203ENST00000393829 N4BP1O75113 896 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TUBB4BP68371 445 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 UBXN1Q04323 297 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 GNL3LQ9NVN8 582 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 LAMB2P55268 1798 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TRIM49BA6NDI0 452 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 LMAN1P49257 510 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 ZSCAN26Q16670 478 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 VPS18Q9P253 973 aa16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 EPN1Q9Y6I3 576 aaPredicted RBP16.4■□□□□ 0.22
ATP6V0A1-203ENST00000393829 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
ATP6V0A1-203ENST00000393829 NDUFA10O95299 355 aa16.39■□□□□ 0.21
ATP6V0A1-203ENST00000393829 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
ATP6V0A1-203ENST00000393829 EXOC5O00471 708 aa16.39■□□□□ 0.21
ATP6V0A1-203ENST00000393829 PARP1P09874 1014 aaKnown RBP16.39■□□□□ 0.21
ATP6V0A1-203ENST00000393829 GUCA1BQ9UMX6 200 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms