RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 FAM217BQ9NTX9 383 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-203ENST00000393811 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-203ENST00000393811 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 TRIM49BA6NDI0 452 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 HSF2BPO75031 334 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 ERVK-24P63145 666 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 CSGALNACT2Q8N6G5 542 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 PPFIA4O75335 1185 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 RPN1P04843 607 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 ATP1A1P05023 1023 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 GGCXP38435 758 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 BCAMP50895 628 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 CACNA2D4Q7Z3S7 1137 aa13.23□□□□□ -0.29
R3HDM2-203ENST00000393811 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 ERLIN2O94905 339 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 USP8P40818 1118 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 GNGT1P63211 74 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 TSPY2A6NKD2 308 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 B4DLN1 442 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 PLEKHA8P1O95397 391 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 SARSP49591 514 aaKnown RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 ASIC1P78348 528 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 ICE2Q659A1 982 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 ALS2CR12Q96Q35 445 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 EPB41L4AQ9HCS5 686 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 OPA1O60313 960 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 USP14P54578 494 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 NOC4LQ9BVI4 516 aaKnown RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
R3HDM2-203ENST00000393811 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RASGRF1Q13972 1273 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 EXOC1Q9NV70 894 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RAB21Q9UL25 225 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 CXCR5P32302 372 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 RIPOR2Q9Y4F9 1068 aa13.21□□□□□ -0.29
R3HDM2-203ENST00000393811 A0A087X0B3 334 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 H7C1D1 291 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 ZNF185O15231 689 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 INPP5BP32019 993 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 SLC7A5Q01650 507 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 HLFQ16534 295 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 SELENOOQ9BVL4 669 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 CAPS2Q9BXY5 557 aa13.21□□□□□ -0.3
R3HDM2-203ENST00000393811 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 SEMA3EO15041 775 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 PDE8AO60658 829 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 HLTFQ14527 1009 aaKnown RBP eCLIP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 MAATS1Q7Z4T9 603 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 MED15Q96RN5 788 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 OVOS2A0A0G2JMS6 1433 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 PRCPP42785 496 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 DPYDQ12882 1025 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 KCTD16Q68DU8 428 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 ZPR1O75312 459 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 USP5P45974 858 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 ZSCAN10Q96SZ4 725 aaPredicted RBP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 FAM207AQ9NSI2 230 aaPredicted RBP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 SOS2Q07890 1332 aaPredicted RBP13.2□□□□□ -0.3
R3HDM2-203ENST00000393811 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms