RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
CASP3-202ENST00000393585 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
CASP3-202ENST00000393585 AOPEPQ8N6M6 819 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 CNNM3Q8NE01 707 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
CASP3-202ENST00000393585 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 ZDHHC15Q96MV8 337 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
CASP3-202ENST00000393585 VAT1LQ9HCJ6 419 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
CASP3-202ENST00000393585 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 SHMT1P34896 483 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 UBA5Q9GZZ9 404 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 UTRNP46939 3433 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 FRMPD2Q68DX3 1309 aaPredicted RBP12.56□□□□□ -0.4
CASP3-202ENST00000393585 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 BAG6P46379 1132 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
CASP3-202ENST00000393585 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
CASP3-202ENST00000393585 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
CASP3-202ENST00000393585 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
CASP3-202ENST00000393585 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
CASP3-202ENST00000393585 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 CALML3P27482 149 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 MCM7P33993 719 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 NOVP48745 357 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 NLRP12P59046 1061 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 PTGDRQ13258 359 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
CASP3-202ENST00000393585 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 DDTLA6NHG4 134 aaPredicted RBP12.55□□□□□ -0.4
CASP3-202ENST00000393585 STXBP3O00186 592 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 PDHBP11177 359 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 ZNF75DP51815 510 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
CASP3-202ENST00000393585 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 SH3GLB2Q9NR46 395 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
CASP3-202ENST00000393585 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
CASP3-202ENST00000393585 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
CASP3-202ENST00000393585 PIGSQ96S52 555 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
CASP3-202ENST00000393585 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 A0A087X0B3 334 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
CASP3-202ENST00000393585 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 NAPAP54920 295 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 TTLL6Q8N841 843 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 CCDC194A0A1B0GVG4 234 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 M0R2N6 131 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 TTLL1O95922 423 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 BMP15O95972 392 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 DHX58Q96C10 678 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
CASP3-202ENST00000393585 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
CASP3-202ENST00000393585 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.4
CASP3-202ENST00000393585 DPEP1P16444 411 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 TRAPPC10P48553 1259 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.4
CASP3-202ENST00000393585 POSTNQ15063 836 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 INF2Q27J81 1249 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 FERMT2Q96AC1 680 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 MRIQ9BWK5 157 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.4
CASP3-202ENST00000393585 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 SIPA1L1O43166 1804 aa12.52□□□□□ -0.4
CASP3-202ENST00000393585 RAD17O75943 681 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms