RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ADAMTS3O15072 1205 aa21.31■■□□□ 1
CBX1-202ENST00000393408 CHMP4BP1P59074 171 aa21.31■■□□□ 1
CBX1-202ENST00000393408 PFKFB3Q16875 520 aaPredicted RBP21.31■■□□□ 1
CBX1-202ENST00000393408 ZNF652Q9Y2D9 606 aa21.31■■□□□ 1
CBX1-202ENST00000393408 KDM4FA0A1W2PPD8 638 aa21.31■■□□□ 1
CBX1-202ENST00000393408 CCDC66A2RUB6 948 aa21.31■■□□□ 1
CBX1-202ENST00000393408 N4BP3O15049 544 aa21.31■■□□□ 1
CBX1-202ENST00000393408 MCM7P33993 719 aa21.31■■□□□ 1
CBX1-202ENST00000393408 PAK1Q13153 545 aa21.31■■□□□ 1
CBX1-202ENST00000393408 ZNF569Q5MCW4 686 aa21.31■■□□□ 1
CBX1-202ENST00000393408 TMTC1Q8IUR5 882 aa21.31■■□□□ 1
CBX1-202ENST00000393408 TTF2Q9UNY4 1162 aaKnown RBP21.31■■□□□ 1
CBX1-202ENST00000393408 VEGFAP15692 232 aaPredicted RBP21.3■■□□□ 1
CBX1-202ENST00000393408 COPB1P53618 953 aaKnown RBP21.3■■□□□ 1
CBX1-202ENST00000393408 SPAG1Q07617 926 aa21.3■■□□□ 1
CBX1-202ENST00000393408 FAM47AQ5JRC9 791 aa21.3■■□□□ 1
CBX1-202ENST00000393408 FUT8Q9BYC5 575 aa21.3■■□□□ 1
CBX1-202ENST00000393408 DCP1AQ9NPI6 582 aaPredicted RBP21.3■■□□□ 1
CBX1-202ENST00000393408 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.3■■□□□ 1
CBX1-202ENST00000393408 KIAA1551Q9HCM1 1747 aa21.3■■□□□ 1
CBX1-202ENST00000393408 ERVK-24P63145 666 aa21.3■■□□□ 1
CBX1-202ENST00000393408 TUBB2AQ13885 445 aa21.3■■□□□ 1
CBX1-202ENST00000393408 ZNF658Q5TYW1 1059 aaPredicted RBP21.3■■□□□ 1
CBX1-202ENST00000393408 FBXO33Q7Z6M2 555 aa21.3■■□□□ 1
CBX1-202ENST00000393408 CEP112Q8N8E3 955 aa21.3■■□□□ 1
CBX1-202ENST00000393408 TUBB2BQ9BVA1 445 aa21.3■■□□□ 1
CBX1-202ENST00000393408 ABHD10Q9NUJ1 306 aa21.3■■□□□ 1
CBX1-202ENST00000393408 CCDC151A5D8V7 595 aa21.29■■□□□ 1
CBX1-202ENST00000393408 ERICH4A6NGS2 130 aa21.29■■□□□ 1
CBX1-202ENST00000393408 MECOMQ03112 1051 aa21.29■■□□□ 1
CBX1-202ENST00000393408 BRD3Q15059 726 aa21.29■■□□□ 1
CBX1-202ENST00000393408 ACRBPQ8NEB7 543 aa21.29■■□□□ 1
CBX1-202ENST00000393408 NELFBQ8WX92 580 aa21.29■■□□□ 1
CBX1-202ENST00000393408 VPS16Q9H269 839 aa21.29■■□□□ 1
CBX1-202ENST00000393408 ZSWIM4Q9H7M6 989 aa21.29■■□□□ 1
CBX1-202ENST00000393408 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
CBX1-202ENST00000393408 RNF225M0QZC1 329 aaPredicted RBP21.29■■□□□ 1
CBX1-202ENST00000393408 POLR3GO15318 223 aaPredicted RBP21.29■■□□□ 1
CBX1-202ENST00000393408 TCP11X2Q5H9J9 407 aa21.29■■□□□ 1
CBX1-202ENST00000393408 ARL6IP4Q66PJ3 421 aaKnown RBP21.29■■□□□ 1
CBX1-202ENST00000393408 C4orf32Q8N8J7 132 aa21.29■■□□□ 1
CBX1-202ENST00000393408 CDCA7Q9BWT1 371 aaPredicted RBP21.29■■□□□ 1
CBX1-202ENST00000393408 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
CBX1-202ENST00000393408 RMND1Q9NWS8 449 aa21.29■■□□□ 1
CBX1-202ENST00000393408 TAB2Q9NYJ8 693 aa21.29■■□□□ 1
CBX1-202ENST00000393408 KCNJ18B7U540 433 aa21.28■■□□□ 1
CBX1-202ENST00000393408 OAS2P29728 719 aaKnown RBP21.28■■□□□ 1
CBX1-202ENST00000393408 KCNJ12Q14500 433 aa21.28■■□□□ 1
CBX1-202ENST00000393408 SMC1AQ14683 1233 aaKnown RBP21.28■■□□□ 1
CBX1-202ENST00000393408 DDB1Q16531 1140 aa21.28■■□□□ 1
CBX1-202ENST00000393408 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
CBX1-202ENST00000393408 CTAGE9A4FU28 777 aa21.28■■□□□ 1
CBX1-202ENST00000393408 RPN1P04843 607 aaKnown RBP21.28■■□□□ 1
CBX1-202ENST00000393408 CDC25AP30304 524 aa21.28■■□□□ 1
CBX1-202ENST00000393408 LONP1P36776 959 aaKnown RBP21.28■■□□□ 1
CBX1-202ENST00000393408 TRIM14Q14142 442 aa21.28■■□□□ 1
CBX1-202ENST00000393408 SLC35F6Q8N357 371 aa21.28■■□□□ 1
CBX1-202ENST00000393408 ANKZF1Q9H8Y5 726 aa21.28■■□□□ 1
CBX1-202ENST00000393408 PUF60Q9UHX1 559 aaKnown RBP21.28■■□□□ 1
CBX1-202ENST00000393408 COL5A3P25940 1745 aaPredicted RBP21.28■■□□□ 1
CBX1-202ENST00000393408 CYP2D6P10635 497 aa21.27■■□□□ 1
CBX1-202ENST00000393408 KLRK1P26718 216 aa21.27■■□□□ 1
CBX1-202ENST00000393408 LONRF2Q1L5Z9 754 aa21.27■■□□□ 1
CBX1-202ENST00000393408 KIF4BQ2VIQ3 1234 aa21.27■■□□□ 1
CBX1-202ENST00000393408 RCSD1Q6JBY9 416 aa21.27■■□□□ 1
CBX1-202ENST00000393408 ANKRD20A12PQ8NF67 263 aa21.27■■□□□ 1
CBX1-202ENST00000393408 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
CBX1-202ENST00000393408 ATP8A2Q9NTI2 1148 aa21.27■■□□□ 1
CBX1-202ENST00000393408 PDS5AQ29RF7 1337 aaKnown RBP21.27■■□□□ 1
CBX1-202ENST00000393408 ARHGAP25P42331 645 aa21.27■■□□□ 1
CBX1-202ENST00000393408 SBK1Q52WX2 424 aa21.27■■□□□ 1
CBX1-202ENST00000393408 CYP26C1Q6V0L0 522 aa21.27■■□□□ 1
CBX1-202ENST00000393408 MAST2Q6P0Q8 1798 aa21.27■□□□□ 0.99
CBX1-202ENST00000393408 ABL1P00519 1130 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 CALML3P27482 149 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 BLIDQ8IZY5 108 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
CBX1-202ENST00000393408 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
CBX1-202ENST00000393408 ARPP21Q9UBL0 812 aaPredicted RBP21.26■□□□□ 0.99
CBX1-202ENST00000393408 GDAQ9Y2T3 454 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 ADAMTS2O95450 1211 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 KIF5BP33176 963 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 PRCPP42785 496 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 MSANTD4Q8NCY6 345 aa21.26■□□□□ 0.99
CBX1-202ENST00000393408 HNRNPLLQ8WVV9 542 aaKnown RBP21.26■□□□□ 0.99
CBX1-202ENST00000393408 FAM205AQ6ZU69 1335 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 ZCCHC17Q9NP64 241 aaKnown RBP21.25■□□□□ 0.99
CBX1-202ENST00000393408 RAB21Q9UL25 225 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 CCDC88AQ3V6T2 1871 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 TSPY2A6NKD2 308 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 POTEB2H3BUK9 544 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 MAP2K7O14733 419 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 IRF2BP1Q8IU81 584 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 NAPGQ99747 312 aaPredicted RBP21.25■□□□□ 0.99
CBX1-202ENST00000393408 SH3GLB2Q9NR46 395 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 MYO1AQ9UBC5 1043 aa21.25■□□□□ 0.99
CBX1-202ENST00000393408 SPATA31A1Q5TZJ5 1347 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 KRT9P35527 623 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 STAT6P42226 847 aa21.24■□□□□ 0.99
CBX1-202ENST00000393408 USP5P45974 858 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms