RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 STXBP3O00186 592 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 MOGSQ13724 837 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 KRT40Q6A162 431 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 CNPY2Q9Y2B0 182 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 GADD45BO75293 160 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 NDUFB10O96000 172 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 CALM1P0DP23 149 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 CALM2P0DP24 149 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 CALM3P0DP25 149 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 NUP88Q99567 741 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 H7C1D1 291 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 TAL1P17542 331 aaPredicted RBP12.54□□□□□ -0.4
PDGFD-202ENST00000393158 EPHX2P34913 555 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
PDGFD-202ENST00000393158 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
PDGFD-202ENST00000393158 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 ERICH2A1L162 156 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 GPR162Q16538 588 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
PDGFD-202ENST00000393158 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
PDGFD-202ENST00000393158 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
PDGFD-202ENST00000393158 F5H6K3 240 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 MYO1BO43795 1136 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 GRIN3BO60391 1043 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 ICA1Q05084 483 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 KLRC3Q07444 240 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 NR5A1Q13285 461 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 ADGRF4Q8IZF3 695 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 DEXIO95424 95 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
PDGFD-202ENST00000393158 PTPAQ15257 358 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 MAP3K11Q16584 847 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 EMILIN3Q9NT22 766 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 KIAA1217Q5T5P2 1943 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 ZNFX1Q9P2E3 1918 aaKnown RBP12.53□□□□□ -0.4
PDGFD-202ENST00000393158 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
PDGFD-202ENST00000393158 HSP90AA2PQ14568 343 aaPredicted RBP12.53□□□□□ -0.4
PDGFD-202ENST00000393158 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
PDGFD-202ENST00000393158 PGBD1Q96JS3 809 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 ZNF536O15090 1300 aa12.53□□□□□ -0.4
PDGFD-202ENST00000393158 CTNND1O60716 968 aaKnown RBP12.52□□□□□ -0.4
PDGFD-202ENST00000393158 PTPRAP18433 802 aa12.52□□□□□ -0.4
PDGFD-202ENST00000393158 FOSBP53539 338 aa12.52□□□□□ -0.4
PDGFD-202ENST00000393158 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.4
PDGFD-202ENST00000393158 WNK4Q96J92 1243 aa12.52□□□□□ -0.4
PDGFD-202ENST00000393158 PLXNB2O15031 1838 aa12.52□□□□□ -0.4
PDGFD-202ENST00000393158 DHX16O60231 1041 aaKnown RBP12.52□□□□□ -0.41
PDGFD-202ENST00000393158 MOB2Q70IA6 237 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 DOCK5Q9H7D0 1870 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 SCG2P13521 617 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 SLC16A2P36021 539 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
PDGFD-202ENST00000393158 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
PDGFD-202ENST00000393158 USP28Q96RU2 1077 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 AFG3L2Q9Y4W6 797 aa12.52□□□□□ -0.41
PDGFD-202ENST00000393158 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 PIGSQ96S52 555 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
PDGFD-202ENST00000393158 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 GJA5P36382 358 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
PDGFD-202ENST00000393158 VPS37CA5D8V6 355 aaPredicted RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 MPHOSPH10O00566 681 aaKnown RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 VGLL4Q14135 290 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
PDGFD-202ENST00000393158 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
PDGFD-202ENST00000393158 REPS2Q8NFH8 660 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms