RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ARID5BQ14865 1188 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 FBXO18Q8NFZ0 1043 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 KIAA1468Q9P260 1216 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 FAM198AQ9UFP1 575 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 FOCADQ5VW36 1801 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 MYH1P12882 1939 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 KIF2AO00139 706 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 GUCY1A2P33402 732 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 PTPN14Q15678 1187 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 C9orf131Q5VYM1 1079 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 ZSCAN29Q8IWY8 852 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 ALG1Q9BT22 464 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 HDAC9Q9UKV0 1011 aa22.76■■□□□ 1.23
CSNK1D-203ENST00000392334 FAM196BA6NMK8 535 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 EGFRP00533 1210 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 SSRP1Q08945 709 aaKnown RBP22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 SDF4Q9BRK5 362 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 hCG_1642624A0A1W2PR95 340 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 CLRN2A0PK11 232 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 DDTLA6NHG4 134 aaPredicted RBP22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 PLEKHA8P1O95397 391 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 U2AF2P26368 475 aaKnown RBP eCLIP22.75■■□□□ 1.239e-9■■■□□ 19.2
CSNK1D-203ENST00000392334 NDUFA8P51970 172 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 STK38Q15208 465 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 MYSM1Q5VVJ2 828 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 NBPF11Q86T75 865 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 CCAR2Q8N163 923 aaKnown RBP22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 KAT14Q9H8E8 782 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 PRDM10Q9NQV6 1147 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 OGFRQ9NZT2 677 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 SERPINB13Q9UIV8 391 aa22.75■■□□□ 1.23
CSNK1D-203ENST00000392334 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 KCNJ6P48051 423 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 CLIC4Q9Y696 253 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 SPTLC2O15270 562 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 IFNAR1P17181 557 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 GABPAQ06546 454 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 DLGAP5Q15398 846 aa22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 RBM26Q5T8P6 1007 aaKnown RBP22.74■■□□□ 1.23
CSNK1D-203ENST00000392334 CCDC196A0A1B0GTZ2 297 aa22.73■■□□□ 1.23
CSNK1D-203ENST00000392334 SH3BP5LQ7L8J4 393 aa22.73■■□□□ 1.23
CSNK1D-203ENST00000392334 FILIP1Q7Z7B0 1213 aa22.73■■□□□ 1.23
CSNK1D-203ENST00000392334 MICALL2Q8IY33 904 aa22.73■■□□□ 1.23
CSNK1D-203ENST00000392334 CRACR2BQ8N4Y2 399 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-203ENST00000392334 TCP10L2B9ZVM9 353 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 FMNL1O95466 1100 aaPredicted RBP22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 HLA-DOAP06340 250 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 SF3A1Q15459 793 aaKnown RBP22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 DGKHQ86XP1 1220 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 CCDC150Q8NCX0 1101 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 PNMA1Q8ND90 353 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 MYOZ2Q9NPC6 264 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 CNOT7Q9UIV1 285 aaKnown RBP22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 NID2Q14112 1375 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 A0A087WWV3 80 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 DDNO94850 711 aaPredicted RBP22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 AKR1B1P15121 316 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 NLRP12P59046 1061 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 NBPF9Q3BBW0 867 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 RASGRP2Q7LDG7 609 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 SAMD7Q7Z3H4 446 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 CLEC10AQ8IUN9 316 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 CEP95Q96GE4 821 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 IDI2Q9BXS1 227 aa22.72■■□□□ 1.23
CSNK1D-203ENST00000392334 DDAH1O94760 285 aa22.71■■□□□ 1.23
CSNK1D-203ENST00000392334 GPC2Q8N158 579 aa22.71■■□□□ 1.23
CSNK1D-203ENST00000392334 TMEM47Q9BQJ4 181 aa22.71■■□□□ 1.23
CSNK1D-203ENST00000392334 WNT10BO00744 389 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 CMA1P23946 247 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 RCAN1P53805 252 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 ZRSR1Q15695 479 aaKnown RBP22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 DPCR1Q3MIW9 517 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 AXDND1Q5T1B0 1012 aaPredicted RBP22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 TRIM22Q8IYM9 498 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 NEDD1Q8NHV4 660 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 CTCFLQ8NI51 663 aaPredicted RBP22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 DPF2Q92785 391 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 TIGD1Q96MW7 591 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 TCP11L1Q9NUJ3 509 aa22.7■■□□□ 1.23
CSNK1D-203ENST00000392334 CALM1P0DP23 149 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 CALM2P0DP24 149 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 CALM3P0DP25 149 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 SHMT1P34896 483 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 TPM4P67936 248 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 KIF23Q02241 960 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 ANO1Q5XXA6 986 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 DNAJC18Q9H819 358 aa22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
CSNK1D-203ENST00000392334 SPDYE4A6NLX3 237 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 MPHOSPH10O00566 681 aaKnown RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF202O95125 648 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF280AP59817 542 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms