RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 BIN1O00499 593 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 EGR3Q06889 387 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 PPP2R5EQ16537 467 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 ANKRD39Q53RE8 183 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 TMC3Q7Z5M5 1100 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 C7orf61Q8IZ16 206 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 LRRN4CLQ8ND94 238 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 ALPK1Q96QP1 1244 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 PHAXQ9H814 394 aaKnown RBP9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
SNORA40.4-201ENST00000390971 C9IYK1 514 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 SIGLEC6O43699 453 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 SNW1Q13573 536 aaKnown RBP9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 MCTP1Q6DN14 999 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 ATG4DQ86TL0 474 aaPredicted RBP9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 PRR13Q9NZ81 148 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 PCDHA11Q9Y5I1 949 aa9.43□□□□□ -0.9
SNORA40.4-201ENST00000390971 TP53P04637 393 aaPredicted RBP9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 JUNBP17275 347 aaPredicted RBP9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 TDRD10Q5VZ19 366 aaKnown RBP9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 SYTL4Q96C24 671 aaPredicted RBP9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 CHST7Q9NS84 486 aa9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 SLAMF8Q9P0V8 285 aa9.42□□□□□ -0.9
SNORA40.4-201ENST00000390971 PRAMEF1O95521 474 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 GNPTABQ3T906 1256 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 AXDND1Q5T1B0 1012 aaPredicted RBP9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 FAM169BQ8N8A8 192 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 TCTN2Q96GX1 697 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 GMLQ99445 158 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 CTNND2Q9UQB3 1225 aa9.41□□□□□ -0.9
SNORA40.4-201ENST00000390971 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 ITGB5P18084 799 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 GDNFP39905 211 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 SLC7A5Q01650 507 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 RNF111Q6ZNA4 994 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 GFOD1Q9NXC2 390 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 MRVI1Q9Y6F6 885 aa9.4□□□□□ -0.9
SNORA40.4-201ENST00000390971 FGRP09769 529 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 AFMP43652 599 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 PCBP3P57721 371 aaKnown RBP9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 TNNI3KQ59H18 835 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 NOL9Q5SY16 702 aaKnown RBP9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 DCAF15Q66K64 600 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 DHX38Q92620 1227 aaKnown RBP9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 ADAMTS10Q9H324 1103 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 TMEM59LQ9UK28 342 aa9.39□□□□□ -0.91
SNORA40.4-201ENST00000390971 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
SNORA40.4-201ENST00000390971 CD247P20963 164 aa9.38□□□□□ -0.91
SNORA40.4-201ENST00000390971 RALGPS1Q5JS13 557 aa9.38□□□□□ -0.91
SNORA40.4-201ENST00000390971 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
SNORA40.4-201ENST00000390971 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
SNORA40.4-201ENST00000390971 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 TEKQ02763 1124 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 NAALADL2Q58DX5 795 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 MCF2L2Q86YR7 1114 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 ASIC4Q96FT7 647 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 DSCC1Q9BVC3 393 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 TCFL5Q9UL49 500 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 PCDHB10Q9UN67 800 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 ZNF451Q9Y4E5 1061 aa9.37□□□□□ -0.91
SNORA40.4-201ENST00000390971 A0A087WZG4 1122 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 SHOXO15266 292 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 SYPP08247 313 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 RAC2P15153 192 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 ETFBP38117 255 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 FOXP3Q9BZS1 431 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 MINPP1Q9UNW1 487 aa9.36□□□□□ -0.91
SNORA40.4-201ENST00000390971 MEIS1O00470 390 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 PAPLNO95428 1278 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 GSNP06396 782 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 ITGA4P13612 1032 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 HK2P52789 917 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 ZNF445P59923 1031 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 VHLLQ6RSH7 139 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 HAUS7Q99871 368 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 ZNF281Q9Y2X9 895 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
SNORA40.4-201ENST00000390971 ENDOUP21128 410 aaKnown RBP9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 RPL10P27635 214 aaKnown RBP9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 BMP8BP34820 402 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 DUSP4Q13115 394 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 CWF19L1Q69YN2 538 aaKnown RBP9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 SPPL2CQ8IUH8 684 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 OXR1Q8N573 874 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
SNORA40.4-201ENST00000390971 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms