RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 UPF3BQ9BZI7 483 aaKnown RBP11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
TRBV20-1-201ENST00000390394 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 DHX16O60231 1041 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 TM4SF4P48230 202 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 ZYXQ15942 572 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 SHROOM1Q2M3G4 852 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 SIAH1Q8IUQ4 282 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 BRF1Q92994 677 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 FEM1BQ9UK73 627 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 MYPNQ86TC9 1320 aa11.29□□□□□ -0.6
TRBV20-1-201ENST00000390394 KLF18A0A0U1RQI7 1052 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 ZBTB43O43298 467 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 PLA2G6O60733 806 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 NDUFB10O96000 172 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 SNHG28P0DPA3 235 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 VCAM1P19320 739 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 GJA5P36382 358 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 STAT2P52630 851 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 KIF23Q02241 960 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 TRAF1Q13077 416 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 IKQ13123 557 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 CCDC96Q2M329 555 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 NUP133Q8WUM0 1156 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 PARK7Q99497 189 aaKnown RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 NAP1L2Q9ULW6 460 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
TRBV20-1-201ENST00000390394 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 CA12O43570 354 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 PDHBP11177 359 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 CPA1P15085 419 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 EVCP57679 992 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 TROAPQ12815 778 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 COG2Q14746 738 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 IFNL1Q8IU54 200 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 MB21D1Q8N884 522 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 BRI3BPQ8WY22 251 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 RPAP3Q9H6T3 665 aaPredicted RBP11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 MYH4Q9Y623 1939 aa11.27□□□□□ -0.61
TRBV20-1-201ENST00000390394 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 BTBD19C9JJ37 291 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 PDHXO00330 501 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 FLOT1O75955 427 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 CDKL5O76039 1030 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 GCLCP48506 637 aaPredicted RBP11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 METAP2P50579 478 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 AK2P54819 239 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 GRM4Q14833 912 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 SMCR8Q8TEV9 937 aaPredicted RBP11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 KIF2CQ99661 725 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 SLF1Q9BQI6 1058 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
TRBV20-1-201ENST00000390394 GOLGA8AA7E2F4 631 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 CPLX1O14810 134 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 ZBED4O75132 1171 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms