RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CEP104O60308 925 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 IL2RBP14784 551 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 GCKP35557 465 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 PTGDRQ13258 359 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 PPP1R7Q15435 360 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 KRT71Q3SY84 523 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
RTF1-201ENST00000389629 KCNK9Q9NPC2 374 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 MCM9Q9NXL9 1143 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 PIK3C2BO00750 1634 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
RTF1-201ENST00000389629 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
RTF1-201ENST00000389629 SLC7A5Q01650 507 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 RRAGAQ7L523 313 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 EPSTI1Q96J88 318 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 NLRC4Q9NPP4 1024 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
RTF1-201ENST00000389629 MMP1P03956 469 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 VEZTQ9HBM0 779 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 PCDH11XQ9BZA7 1347 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 PCDH11YQ9BZA8 1340 aa15.87■□□□□ 0.13
RTF1-201ENST00000389629 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 DLC1Q96QB1 1528 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 NBPF14Q5TI25 921 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PANX2Q96RD6 677 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PPLO60437 1756 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 N4BP1O75113 896 aaKnown RBP15.86■□□□□ 0.13
RTF1-201ENST00000389629 GUCY2DQ02846 1103 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PDCLQ13371 301 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 SDR42E1Q8WUS8 393 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 FOXP1Q9H334 677 aaPredicted RBP15.86■□□□□ 0.13
RTF1-201ENST00000389629 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 TNKSO95271 1327 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 OVOS2A0A0J9YW53 1432 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 OVOS2Q6IE36 1432 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 NEURL4Q96JN8 1562 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 CIAO1O76071 339 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 GGCXP38435 758 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 GNAQP50148 359 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 TRIM58Q8NG06 486 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 GSDMAQ96QA5 445 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 ZSWIM5Q9P217 1185 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 ODF2LQ9ULJ1 636 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 TBC1D8O95759 1140 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PPARAQ07869 468 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 PPP2R5AQ15172 486 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 NUP58Q9BVL2 599 aa15.86■□□□□ 0.13
RTF1-201ENST00000389629 TEX33O43247 280 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 L2HGDHQ9H9P8 463 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 PXDNLA1KZ92 1463 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 ARHGEF28Q8N1W1 1705 aaKnown RBP15.85■□□□□ 0.13
RTF1-201ENST00000389629 NIP7Q9Y221 180 aaKnown RBP eCLIP15.85■□□□□ 0.13
RTF1-201ENST00000389629 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
RTF1-201ENST00000389629 PDE8AO60658 829 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 CLTAP09496 248 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 CTNNA1P35221 906 aaKnown RBP15.85■□□□□ 0.13
RTF1-201ENST00000389629 ADD2P35612 726 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
RTF1-201ENST00000389629 GREM2Q9H772 168 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 TRAF5O00463 557 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 FDPSP14324 419 aaKnown RBP15.85■□□□□ 0.13
RTF1-201ENST00000389629 CACNA2D3Q8IZS8 1091 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 LRRC45Q96CN5 670 aa15.85■□□□□ 0.13
RTF1-201ENST00000389629 LRCH2Q5VUJ6 765 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 METTL16Q86W50 562 aaKnown RBP15.84■□□□□ 0.13
RTF1-201ENST00000389629 CCDC50Q8IVM0 306 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 TMEM110-MUSTN1A8MSY1 372 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 MFAP3LO75121 409 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 ZNF76P36508 570 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 CYB5R4Q7L1T6 521 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 RIN2Q8WYP3 895 aaPredicted RBP15.84■□□□□ 0.13
RTF1-201ENST00000389629 N4BP2L2Q92802 583 aaPredicted RBP15.84■□□□□ 0.13
RTF1-201ENST00000389629 ADGRG1Q9Y653 693 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 IFNAR1P17181 557 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 CDC27P30260 824 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 KCNJ6P48051 423 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 MAP3K9P80192 1104 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 TBC1D10CQ8IV04 446 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 HYOU1Q9Y4L1 999 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 LACTBP83111 547 aaPredicted RBP15.84■□□□□ 0.13
RTF1-201ENST00000389629 MYO1AQ9UBC5 1043 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
RTF1-201ENST00000389629 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.13
RTF1-201ENST00000389629 CDC25AP30304 524 aa15.83■□□□□ 0.13
RTF1-201ENST00000389629 SNCBQ16143 134 aa15.83■□□□□ 0.13
RTF1-201ENST00000389629 FAM47AQ5JRC9 791 aa15.83■□□□□ 0.13
RTF1-201ENST00000389629 SRPRBQ9Y5M8 271 aaKnown RBP15.83■□□□□ 0.13
RTF1-201ENST00000389629 H7C1D1 291 aa15.83■□□□□ 0.12
RTF1-201ENST00000389629 EXOC5O00471 708 aa15.83■□□□□ 0.12
RTF1-201ENST00000389629 PRKAB2O43741 272 aa15.83■□□□□ 0.12
RTF1-201ENST00000389629 GTPBP6O43824 516 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms