RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 TINF2Q9BSI4 451 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 C1QTNF1Q9BXJ1 281 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 EHD4Q9H223 541 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 MTX1Q13505 466 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 KCTD2Q14681 263 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 RAB30Q15771 203 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 KIAA1755Q5JYT7 1200 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 ANKRD33Q7Z3H0 272 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
IFT88-203ENST00000389373 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
IFT88-203ENST00000389373 RAD21O60216 631 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 SLC25A27O95847 323 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 GNAI2P04899 355 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
IFT88-203ENST00000389373 TFF2Q03403 129 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 EVX2Q03828 476 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 TMEM132BQ14DG7 1078 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
IFT88-203ENST00000389373 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 HCN4Q9Y3Q4 1203 aa11.73□□□□□ -0.53
IFT88-203ENST00000389373 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 FGBP02675 491 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
IFT88-203ENST00000389373 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
IFT88-203ENST00000389373 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 EPHX3Q9H6B9 360 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
IFT88-203ENST00000389373 TBX21Q9UL17 535 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 CDK5RAP2Q96SN8 1893 aa11.72□□□□□ -0.53
IFT88-203ENST00000389373 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 MYH1P12882 1939 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 MYADML2A6NDP7 307 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 TLR3O15455 904 aaKnown RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 BMP1P13497 986 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 CYP2C18P33260 490 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 STAT3P40763 770 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 KCNQ1P51787 676 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 RABGGTBP53611 331 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 RASIP1Q5U651 963 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 OTOP2Q7RTS6 562 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 KLHDC9Q8NEP7 349 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 LRFN3Q9BTN0 628 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 MTIF3Q9H2K0 278 aaKnown RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 ANTXR1Q9H6X2 564 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 TLR7Q9NYK1 1049 aaKnown RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 CXXC1Q9P0U4 656 aaPredicted RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 YBX2Q9Y2T7 364 aaKnown RBP11.71□□□□□ -0.53
IFT88-203ENST00000389373 PLXNA1Q9UIW2 1896 aa11.71□□□□□ -0.53
IFT88-203ENST00000389373 ZNF236Q9UL36 1845 aa11.71□□□□□ -0.54
IFT88-203ENST00000389373 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 MAGEB6P1A0A0J9YX57 407 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 ARVCFO00192 962 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 IGSF3O75054 1194 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
IFT88-203ENST00000389373 ASGR1P07306 291 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 CYP2D6P10635 497 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 CDK7P50613 346 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 ICA1Q05084 483 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 GABPAQ06546 454 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 RIOX2Q8IUF8 465 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 HERVK_113Q902F9 699 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 DYNLL2Q96FJ2 89 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
IFT88-203ENST00000389373 SPC25Q9HBM1 224 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 FBXO28Q9NVF7 368 aa11.7□□□□□ -0.54
IFT88-203ENST00000389373 ELP1O95163 1332 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 TCF20Q9UGU0 1960 aaKnown RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 RFXAPO00287 272 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 BCAR3O75815 825 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 MYOGP15173 224 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 CCL23P55773 120 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 PPP2R2DQ66LE6 453 aa11.69□□□□□ -0.54
IFT88-203ENST00000389373 CCSAPQ6IQ19 270 aaPredicted RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 PCSK9Q8NBP7 692 aaKnown RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
IFT88-203ENST00000389373 SH2D4AQ9H788 454 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms