RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MRPL44Q9H9J2 332 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 SAMD15Q9P1V8 674 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 COL3A1P02461 1466 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 PTPRMP28827 1452 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 EXOC5O00471 708 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 PDE8AO60658 829 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 PTPREP23469 700 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 CDC27P30260 824 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 RBM5P52756 815 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 CLNS1AP54105 237 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 LMBR1Q8WVP7 490 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 NSRP1Q9H0G5 558 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 GNA11P29992 359 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 ADD2P35612 726 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 UBE3CQ15386 1083 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 SRLQ86TD4 932 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 HDAC6Q9UBN7 1215 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 BAIAP2L1Q9UHR4 511 aa14.62□□□□□ -0.07
TRAPPC9-201ENST00000389328 FDPSP14324 419 aaKnown RBP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 TCP1P17987 556 aaKnown RBP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 KCNJ6P48051 423 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 KRT71Q3SY84 523 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 TBC1D10CQ8IV04 446 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 ZNF609O15014 1411 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 USP17L12C9JPN9 530 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 USP17L21D6R901 530 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 ATP6V1AP38606 617 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 IFT88Q13099 833 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 LRRC45Q96CN5 670 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■■□ 21.3
TRAPPC9-201ENST00000389328 ZRSR2Q15696 482 aaKnown RBP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 NELFCDQ8IXH7 590 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 GPKOWQ92917 476 aaPredicted RBP eCLIP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 AATFQ9NY61 560 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 MYO3AQ8NEV4 1616 aa14.61□□□□□ -0.07
TRAPPC9-201ENST00000389328 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 BCAMP50895 628 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 KLHL30Q0D2K2 578 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 INF2Q27J81 1249 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 MB21D2Q8IYB1 491 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RRP36Q96EU6 259 aaKnown RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 ALKQ9UM73 1620 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 A0A1B0GUA9 196 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 TBC1D8O95759 1140 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RUFY4Q6ZNE9 571 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 ZSCAN10Q96SZ4 725 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RPS6KA1Q15418 735 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 CCDC26Q8TAB7 109 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RASGRP4Q8TDF6 673 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RSRC1Q96IZ7 334 aaKnown RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 SLC39A2Q9NP94 309 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 KCNK9Q9NPC2 374 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 GGCXP38435 758 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 RASSF7Q02833 373 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 PAXIP1Q6ZW49 1069 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 LRWD1Q9UFC0 647 aa14.6□□□□□ -0.07
TRAPPC9-201ENST00000389328 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 CIAO1O76071 339 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 PPP1R2P41236 205 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 TADA2BQ86TJ2 420 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 N4BP1O75113 896 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 LDHCP07864 332 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 REXO1L1PQ8IX06 675 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 TC2NQ8N9U0 490 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 RASAL2Q9UJF2 1139 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 ADGRB1O14514 1584 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 KCNK3O14649 394 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 DAAM2Q86T65 1068 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 KCNB2Q92953 911 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 CNOT6LQ96LI5 555 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 CPS1P31327 1500 aa14.59□□□□□ -0.07
TRAPPC9-201ENST00000389328 NEO1Q92859 1461 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 PDE8BO95263 885 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 CTSWP56202 376 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 BLIDQ8IZY5 108 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 EPB41L5Q9HCM4 733 aa14.58□□□□□ -0.07
TRAPPC9-201ENST00000389328 A0A1W2PRG0 241 aa14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 EHHADHQ08426 723 aa14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 PDCLQ13371 301 aa14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 ASIC2Q16515 512 aa14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 JPH2Q9BR39 696 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 PIH1D3Q9NQM4 214 aaKnown RBP14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 MROH7-TTC4A0A0A0MT08 1334 aa14.58□□□□□ -0.08
TRAPPC9-201ENST00000389328 SCG2P13521 617 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms