RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 USP17L13C9JLJ4 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L11C9JVI0 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L18D6R9N7 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L22D6RA61 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L17D6RBQ6 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L19D6RCP7 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L20D6RJB6 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 F5H6K3 240 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 WDR46O15213 610 aaKnown RBP19.02■□□□□ 0.64
SNRPB-201ENST00000381342 UBXN2AP68543 259 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 KLRC3Q07444 240 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 USP17L24Q0WX57 530 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 FAM83BQ5T0W9 1011 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 MB21D2Q8IYB1 491 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-201ENST00000381342 RASEFQ8IZ41 740 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-201ENST00000381342 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 ZSCAN10Q96SZ4 725 aaPredicted RBP19.02■□□□□ 0.64
SNRPB-201ENST00000381342 TMEM47Q9BQJ4 181 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 UBAC1Q9BSL1 405 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 SYNPO2Q9UMS6 1093 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 MGAMO43451 1857 aa19.02■□□□□ 0.64
SNRPB-201ENST00000381342 GRK4P32298 578 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 HSPA4P34932 840 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 ANTXR2P58335 489 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 CHST3Q7LGC8 479 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 SH3TC2Q8TF17 1288 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 ZNF333Q96JL9 665 aa19.01■□□□□ 0.63
SNRPB-201ENST00000381342 MYCP01106 439 aaPredicted RBP19■□□□□ 0.63
SNRPB-201ENST00000381342 TOP1P11387 765 aaKnown RBP19■□□□□ 0.63
SNRPB-201ENST00000381342 CTGFP29279 349 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 HERVK_113P62684 666 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 PRKCZQ05513 592 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 C8orf34Q49A92 452 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 SLFN13Q68D06 897 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
SNRPB-201ENST00000381342 USP26Q9BXU7 913 aa19■□□□□ 0.63
SNRPB-201ENST00000381342 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
SNRPB-201ENST00000381342 PEX10O60683 326 aa18.99■□□□□ 0.63
SNRPB-201ENST00000381342 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
SNRPB-201ENST00000381342 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
SNRPB-201ENST00000381342 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SNRPB-201ENST00000381342 SLAIN1Q8ND83 568 aa18.99■□□□□ 0.63
SNRPB-201ENST00000381342 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
SNRPB-201ENST00000381342 ISY1Q9ULR0 285 aaKnown RBP18.99■□□□□ 0.63
SNRPB-201ENST00000381342 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
SNRPB-201ENST00000381342 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
SNRPB-201ENST00000381342 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
SNRPB-201ENST00000381342 PRC1O43663 620 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 FLOT1O75955 427 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 SEC24BO95487 1268 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 SEC23AQ15436 765 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 GPRC5AQ8NFJ5 357 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 KCNB2Q92953 911 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 TTC14Q96N46 770 aa18.98■□□□□ 0.63
SNRPB-201ENST00000381342 POTEFA5A3E0 1075 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 IFIT3O14879 490 aaKnown RBP18.97■□□□□ 0.63
SNRPB-201ENST00000381342 ADCY3O60266 1144 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 MCCP23508 829 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 FLT3LGP49771 235 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 KRT32Q14532 448 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 TSGA10IPQ3SY00 556 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 IFIT1BQ5T764 474 aaKnown RBP18.97■□□□□ 0.63
SNRPB-201ENST00000381342 POTEEQ6S8J3 1075 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 PNMA1Q8ND90 353 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 GMCL1Q96IK5 515 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 PAGR1Q9BTK6 254 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 KAT14Q9H8E8 782 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 SENP2Q9HC62 589 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 MORF4L1Q9UBU8 362 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 GABRQQ9UN88 632 aa18.97■□□□□ 0.63
SNRPB-201ENST00000381342 BMP3P12645 472 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 MCM5P33992 734 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 SLC1A4P43007 532 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 CCNA1P78396 465 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 IRF5Q13568 498 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
SNRPB-201ENST00000381342 CCDC96Q2M329 555 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 TMEM67Q5HYA8 995 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 ANKS1AQ92625 1134 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 ATG4CQ96DT6 458 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 NEK1Q96PY6 1258 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 LRRC2Q9BYS8 371 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 TXNRD2Q9NNW7 524 aa18.96■□□□□ 0.63
SNRPB-201ENST00000381342 GPHNQ9NQX3 736 aaPredicted RBP18.96■□□□□ 0.63
SNRPB-201ENST00000381342 ERICH2A1L162 156 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 PDHBP11177 359 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 CPA1P15085 419 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 COG2Q14746 738 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 WTAPQ15007 396 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 KCTD1Q719H9 257 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 PXYLP1Q8TE99 480 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 DCAF4Q8WV16 495 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
SNRPB-201ENST00000381342 JAKMIP1Q96N16 626 aaKnown RBP18.95■□□□□ 0.62
SNRPB-201ENST00000381342 FRMPD2Q68DX3 1309 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms