RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SAFBQ15424 915 aaKnown RBP eCLIP9.24□□□□□ -0.93
ERCC8-202ENST00000381118 PFKFB3Q16875 520 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-202ENST00000381118 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 SIAH1Q8IUQ4 282 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
ERCC8-202ENST00000381118 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 OXER1Q8TDS5 423 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 USP28Q96RU2 1077 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 ZBTB21Q9ULJ3 1066 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 A0A1W2PRG0 241 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 TBC1D12O60347 775 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SLC16A2P36021 539 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 CAP2P40123 477 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SLC1A4P43007 532 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 ZYXQ15942 572 aaKnown RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 APOBEC3FQ8IUX4 373 aaKnown RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SNHG28P0DPA3 235 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 ASPRV1Q53RT3 343 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SLFN13Q68D06 897 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 DLK2Q6UY11 383 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 BRAPQ7Z569 592 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 LEO1Q8WVC0 666 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 PIGSQ96S52 555 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
ERCC8-202ENST00000381118 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
ERCC8-202ENST00000381118 F5H6K3 240 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 NLRP5P59047 1200 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 KLRC3Q07444 240 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 ZNF543Q08ER8 600 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 PRKG1Q13976 671 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 CSPP1Q1MSJ5 1256 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 KLHL40Q2TBA0 621 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 SKOR2Q2VWA4 1001 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 CAVIN1Q6NZI2 390 aaKnown RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 ACER1Q8TDN7 264 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 MKL1Q969V6 931 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 RRP36Q96EU6 259 aaKnown RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 ZNF396Q96N95 335 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 LZTS2Q9BRK4 669 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 PHF20Q9BVI0 1012 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 SPZ1Q9BXG8 430 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 GLIS2Q9BZE0 524 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 SEC63Q9UGP8 760 aaKnown RBP9.22□□□□□ -0.93
ERCC8-202ENST00000381118 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 DOCK1Q14185 1865 aa9.22□□□□□ -0.93
ERCC8-202ENST00000381118 PHF20L1A8MW92 1017 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 ATP2B1P20020 1258 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.931e-6■■■■□ 25.1
ERCC8-202ENST00000381118 KRT2P35908 639 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 IKQ13123 557 aaPredicted RBP9.21□□□□□ -0.93
ERCC8-202ENST00000381118 GPATCH4Q5T3I0 446 aaKnown RBP9.21□□□□□ -0.93
ERCC8-202ENST00000381118 TYW1BQ6NUM6 668 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 ADGRF4Q8IZF3 695 aa9.21□□□□□ -0.93
ERCC8-202ENST00000381118 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 ADAMTS3O15072 1205 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 GRIN3BO60391 1043 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 NDUFB10O96000 172 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 ASNSP08243 561 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 INPP5BP32019 993 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 UBE2HP62256 183 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 RIOX1Q9H6W3 641 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 BRMS1Q9HCU9 246 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 SMCHD1A6NHR9 2005 aa9.21□□□□□ -0.94
ERCC8-202ENST00000381118 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 ADM5C9JUS6 153 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 NAPAP54920 295 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 NPY5RQ15761 445 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 NOM1Q5C9Z4 860 aaKnown RBP9.2□□□□□ -0.94
ERCC8-202ENST00000381118 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
ERCC8-202ENST00000381118 KIAA1755Q5JYT7 1200 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
ERCC8-202ENST00000381118 RGS22Q8NE09 1264 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 GMCL1P1Q8NEA9 526 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 RASGRP4Q8TDF6 673 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 DCAF4Q8WV16 495 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 ZKSCAN4Q969J2 545 aaPredicted RBP9.2□□□□□ -0.94
ERCC8-202ENST00000381118 WRNIP1Q96S55 665 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 FOXP1Q9H334 677 aaPredicted RBP9.2□□□□□ -0.94
ERCC8-202ENST00000381118 JMJD4Q9H9V9 463 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 BARHL2Q9NY43 387 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 ELP1O95163 1332 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 TMEM232C9JQI7 657 aa9.2□□□□□ -0.94
ERCC8-202ENST00000381118 STXBP3O00186 592 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms