RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 FOXP1Q9H334 677 aaPredicted RBP22.66■■□□□ 1.22
CCM2-202ENST00000381112 RIOX1Q9H6W3 641 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 ADARB2Q9NS39 739 aaKnown RBP22.66■■□□□ 1.22
CCM2-202ENST00000381112 GGA3Q9NZ52 723 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 BTBD18B2RXH4 712 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
CCM2-202ENST00000381112 SPATA32Q96LK8 384 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 USP28Q96RU2 1077 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 UBA5Q9GZZ9 404 aa22.66■■□□□ 1.22
CCM2-202ENST00000381112 A0A1W2PRG0 241 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 GRIN3BO60391 1043 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 GNL2Q13823 731 aaKnown RBP22.65■■□□□ 1.22
CCM2-202ENST00000381112 NBPF12Q5TAG4 269 aaPredicted RBP22.65■■□□□ 1.22
CCM2-202ENST00000381112 SLFN13Q68D06 897 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 NOSTRINQ8IVI9 506 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 DCAF4Q8WV16 495 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 GPCPD1Q9NPB8 672 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 SH3GLB2Q9NR46 395 aa22.65■■□□□ 1.22
CCM2-202ENST00000381112 F5H6K3 240 aa22.64■■□□□ 1.22
CCM2-202ENST00000381112 UBE2HP62256 183 aa22.64■■□□□ 1.22
CCM2-202ENST00000381112 KLRC3Q07444 240 aa22.64■■□□□ 1.22
CCM2-202ENST00000381112 NPY5RQ15761 445 aa22.64■■□□□ 1.22
CCM2-202ENST00000381112 FTOQ9C0B1 505 aaKnown RBP eCLIP22.64■■□□□ 1.22
CCM2-202ENST00000381112 MBD3O95983 291 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 CCDC96Q2M329 555 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 DPY19L2Q6NUT2 758 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 OXER1Q8TDS5 423 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 RRP36Q96EU6 259 aaKnown RBP22.64■■□□□ 1.21
CCM2-202ENST00000381112 L3MBTL3Q96JM7 780 aaPredicted RBP22.64■■□□□ 1.21
CCM2-202ENST00000381112 RCOR1Q9UKL0 485 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 PPP2R3BQ9Y5P8 575 aa22.64■■□□□ 1.21
CCM2-202ENST00000381112 GPKOWQ92917 476 aaPredicted RBP eCLIP22.63■■□□□ 1.21
CCM2-202ENST00000381112 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
CCM2-202ENST00000381112 ARHGEF10LQ9HCE6 1279 aa22.63■■□□□ 1.21
CCM2-202ENST00000381112 RTEL1Q9NZ71 1219 aa22.63■■□□□ 1.21
CCM2-202ENST00000381112 PITPNM2Q9BZ72 1349 aa22.63■■□□□ 1.21
CCM2-202ENST00000381112 ZC3H4Q9UPT8 1303 aaKnown RBP22.63■■□□□ 1.21
CCM2-202ENST00000381112 NDUFB10O96000 172 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 ASNSP08243 561 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 SLC1A4P43007 532 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 CEBPZQ03701 1054 aaKnown RBP22.62■■□□□ 1.21
CCM2-202ENST00000381112 NR5A1Q13285 461 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 WWC2Q6AWC2 1192 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 TTBK2Q6IQ55 1244 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 KCTD1Q719H9 257 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 BARHL2Q9NY43 387 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 TMX2Q9Y320 296 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 TCHHQ07283 1943 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 KRT2P35908 639 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 FAM177A1Q8N128 213 aaPredicted RBP22.62■■□□□ 1.21
CCM2-202ENST00000381112 HOOK2Q96ED9 719 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 PIGSQ96S52 555 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 VAT1LQ9HCJ6 419 aa22.62■■□□□ 1.21
CCM2-202ENST00000381112 STXBP3O00186 592 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 ECE1P42892 770 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 TYW1BQ6NUM6 668 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 HEATR3Q7Z4Q2 680 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 POLR3EQ9NVU0 708 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
CCM2-202ENST00000381112 SEC63Q9UGP8 760 aaKnown RBP22.61■■□□□ 1.21
CCM2-202ENST00000381112 MYH4Q9Y623 1939 aa22.61■■□□□ 1.21
CCM2-202ENST00000381112 RAD21O60216 631 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 NASPP49321 788 aaPredicted RBP22.6■■□□□ 1.21
CCM2-202ENST00000381112 NLRP5P59047 1200 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 PRAMEF18Q5VWM3 479 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 HOMER1Q86YM7 354 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 ADGRF4Q8IZF3 695 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 JMJD4Q9H9V9 463 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 GINM1Q9NU53 330 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 CLIC4Q9Y696 253 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 BAZ2BQ9UIF8 2168 aaKnown RBP22.6■■□□□ 1.21
CCM2-202ENST00000381112 CTNND1O60716 968 aaKnown RBP22.6■■□□□ 1.21
CCM2-202ENST00000381112 CALML3P27482 149 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 TNFRSF25Q93038 417 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 BRMS1Q9HCU9 246 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 MYH6P13533 1939 aa22.6■■□□□ 1.21
CCM2-202ENST00000381112 ANO1Q5XXA6 986 aa22.59■■□□□ 1.21
CCM2-202ENST00000381112 MTMR8Q96EF0 704 aa22.59■■□□□ 1.21
CCM2-202ENST00000381112 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
CCM2-202ENST00000381112 GZF1Q9H116 711 aaPredicted RBP22.59■■□□□ 1.21
CCM2-202ENST00000381112 ZNF112Q9UJU3 913 aa22.59■■□□□ 1.21
CCM2-202ENST00000381112 YEATS4O95619 227 aa22.58■■□□□ 1.21
CCM2-202ENST00000381112 SLC16A2P36021 539 aa22.58■■□□□ 1.21
CCM2-202ENST00000381112 LINC00301Q8NCQ3 95 aa22.58■■□□□ 1.21
CCM2-202ENST00000381112 CCDC148Q8NFR7 591 aa22.58■■□□□ 1.21
CCM2-202ENST00000381112 GLTPD2A6NH11 291 aa22.58■■□□□ 1.2
CCM2-202ENST00000381112 BMP3P12645 472 aa22.58■■□□□ 1.2
CCM2-202ENST00000381112 PGBD1Q96JS3 809 aa22.58■■□□□ 1.2
CCM2-202ENST00000381112 NUP88Q99567 741 aaPredicted RBP22.58■■□□□ 1.2
CCM2-202ENST00000381112 MYH15Q9Y2K3 1946 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 PNMA6FA0A0J9YX94 578 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 hCG_1984214I3L0E3 225 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 TOB1P50616 345 aaPredicted RBP22.57■■□□□ 1.2
CCM2-202ENST00000381112 RILPL1Q5EBL4 403 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 KIAA1755Q5JYT7 1200 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 GALNT17Q6IS24 598 aa22.57■■□□□ 1.2
CCM2-202ENST00000381112 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
CCM2-202ENST00000381112 ZNF713Q8N859 430 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms