RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 NBPF9Q3BBW0 867 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 WLSQ5T9L3 541 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 EMBQ6PCB8 327 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 NBPF5PQ86XG9 351 aaPredicted RBP8.14□□□□□ -1.11
TRIM6-202ENST00000380097 ARFGAP2Q8N6H7 521 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
TRIM6-202ENST00000380097 SH3GL3Q99963 347 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.14□□□□□ -1.11
TRIM6-202ENST00000380097 IGSF1Q8N6C5 1336 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 SH3TC1Q8TE82 1336 aa8.14□□□□□ -1.11
TRIM6-202ENST00000380097 COBLO75128 1261 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 CABP4P57796 275 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 HDLBPQ00341 1268 aaKnown RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 SMYD4Q8IYR2 804 aaPredicted RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 IFT81Q8WYA0 676 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 XAGE2Q96GT9 111 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 CCDC43Q96MW1 224 aaKnown RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 LRRC1Q9BTT6 524 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 HAUS2Q9NVX0 235 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 KDRP35968 1356 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 ZNF213O14771 459 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 RASSF9O75901 435 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 RBBP5Q15291 538 aaKnown RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 SPA17Q15506 151 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 PAPD7Q5XG87 772 aaKnown RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 C8orf74Q6P047 294 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 SAAL1Q96ER3 474 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 TFR2Q9UP52 801 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 FAM237AA0A1B0GTK4 181 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 CCNHP51946 323 aaPredicted RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 FKBP4Q02790 459 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRIM6-202ENST00000380097 PTGISQ16647 500 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 TTMPQ5BVD1 217 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 RRAGBQ5VZM2 374 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 MYCBPAPQ8TBZ2 947 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 MICAL1Q8TDZ2 1067 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 PSMB7Q99436 277 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 MYD88Q99836 296 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 ATP6V0A4Q9HBG4 840 aa8.13□□□□□ -1.11
TRIM6-202ENST00000380097 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 ABCC6O95255 1503 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 USO1O60763 962 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TACC1O75410 805 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 FAM107AO95990 144 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 IFIT1P09914 478 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 EPB41P11171 864 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 KRT31Q15323 416 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TTF1Q15361 905 aaPredicted RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 CCDC96Q2M329 555 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 MEX3CQ5U5Q3 659 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 ZIM3Q96PE6 472 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 SLC26A6Q9BXS9 759 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 KIF9Q9HAQ2 790 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 ITIH6Q6UXX5 1313 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 SEMA3EO15041 775 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 RNF113AO15541 343 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TOM1O60784 492 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 MDH1P40925 334 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 COPB1P53618 953 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 APBA1Q02410 837 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 COPS6Q7L5N1 327 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 ELOA2Q8IYF1 753 aaPredicted RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TOPAZ1Q8N9V7 1692 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 MST1RQ04912 1400 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 TTC36A6NLP5 189 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 RNMTO43148 476 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 SARSP49591 514 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 KCNQ4P56696 695 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 PPP1R7Q15435 360 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 EZH2Q15910 746 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 NT5DC1Q5TFE4 455 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 KDM7AQ6ZMT4 941 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 CPLX4Q7Z7G2 160 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 IFT20Q8IY31 132 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 CACNA2D3Q8IZS8 1091 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 HDAC7Q8WUI4 952 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 THOC1Q96FV9 657 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 KAZALD1Q96I82 304 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 MED15Q96RN5 788 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 PSMD1Q99460 953 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 PAIP2Q9BPZ3 127 aaKnown RBP8.12□□□□□ -1.11
TRIM6-202ENST00000380097 STIM2Q9P246 746 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 HPS5Q9UPZ3 1129 aa8.12□□□□□ -1.11
TRIM6-202ENST00000380097 RFX7Q2KHR2 1363 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 USP31Q70CQ4 1352 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 ANO9A1A5B4 782 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
TRIM6-202ENST00000380097 BTBD18B2RXH4 712 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms