RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZSCAN31Q96LW9 406 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 IQCGQ9H095 443 aaKnown RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 MAPK8IP1Q9UQF2 711 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 JCADQ9P266 1359 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 M0R2C6 588 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ATP6V1G2O95670 118 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 IGKV5-2P06315 115 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-201ENST00000379989 IL15P40933 162 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-201ENST00000379989 HSD3B7Q9H2F3 369 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ATP4AP20648 1035 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 MYBPC3Q14896 1274 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 SDCCAG8Q86SQ7 713 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-201ENST00000379989 VSTM4Q8IW00 320 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ENGASEQ8NFI3 743 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 CUL5Q93034 780 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 LAMB2P55268 1798 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 A0A0U1RQJ8 604 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 TMEM232C9JQI7 657 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 UPP2O95045 317 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 CASP7P55210 303 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC15Q0P6D6 951 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 KRT32Q14532 448 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 PPP1R15BQ5SWA1 713 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 SFMBT2Q5VUG0 894 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ATRIPQ8WXE1 791 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 GGA2Q9UJY4 613 aa8.37□□□□□ -1.07
CDKL5-201ENST00000379989 CARMIL3Q8ND23 1372 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 STX10O60499 249 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 ANP32DO95626 131 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 PDCP20941 246 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 PSMA5P28066 241 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 HDLBPQ00341 1268 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 XRCC4Q13426 336 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 TUBB2AQ13885 445 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 ANKRD1Q15327 319 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 TUBB2BQ9BVA1 445 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 EPN3Q9H201 632 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 LZTFL1Q9NQ48 299 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 MAP3K13O43283 966 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 PCCAP05165 728 aaPredicted RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 TOP1P11387 765 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF24P17028 368 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 NAT1P18440 290 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 KCNA4P22459 653 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 CEBPZQ03701 1054 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 CUL3Q13618 768 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 CHRNA2Q15822 529 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 GSPT2Q8IYD1 628 aaKnown RBP8.36□□□□□ -1.07
CDKL5-201ENST00000379989 SELENOOQ9BVL4 669 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 PIDD1Q9HB75 910 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 FANCLQ9NW38 375 aa8.36□□□□□ -1.07
CDKL5-201ENST00000379989 A6NNZ2 444 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 SMIM24O75264 130 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CAPN15O75808 1086 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 A1BGP04217 495 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 LSP1P33241 339 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ABL2P42684 1182 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CTCFP49711 727 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 USP14P54578 494 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 UBASH3AP57075 661 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MPP3Q13368 585 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 MTF1Q14872 753 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 TUBB8Q3ZCM7 444 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 SUCLG2Q96I99 432 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 LSG1Q9H089 658 aaKnown RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 SLIT2O94813 1529 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 GOLGA8KD6RF30 607 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 TOM1O60784 492 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 PIP4K2BP78356 416 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 TCIRG1Q13488 830 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 WHAMMP3Q1A5X7 153 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC73Q6ZRK6 1079 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC121Q6ZUS5 278 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 CCDC170Q8IYT3 715 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 SYCP3Q8IZU3 236 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 BAIAP2L1Q9UHR4 511 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 PDLIM1O00151 329 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-201ENST00000379989 FAM160A1Q05DH4 1040 aa8.35□□□□□ -1.07
CDKL5-201ENST00000379989 RESTQ13127 1097 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms