RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 IQCB1Q15051 598 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 EHD4Q9H223 541 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
SNX2-201ENST00000379516 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
SNX2-201ENST00000379516 TTLL1O95922 423 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 PDHBP11177 359 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 KCNA3P22001 575 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
SNX2-201ENST00000379516 CEP57L1Q8IYX8 460 aa17.22■□□□□ 0.35
SNX2-201ENST00000379516 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
SNX2-201ENST00000379516 DDTLA6NHG4 134 aaPredicted RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 STXBP3O00186 592 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 BIN1O00499 593 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 TRAPPC10P48553 1259 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 BECN2A8MW95 431 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 POLR2DO15514 142 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 RASGRP4Q8TDF6 673 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 PSMD1Q99460 953 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 TDRD3Q9H7E2 651 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
SNX2-201ENST00000379516 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
SNX2-201ENST00000379516 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 PTGDRQ13258 359 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
SNX2-201ENST00000379516 MCM7P33993 719 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 NAPAP54920 295 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 NLRP12P59046 1061 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 PNOCQ13519 176 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 SH3BP5LQ7L8J4 393 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 DHX40Q8IX18 779 aaKnown RBP17.2■□□□□ 0.34
SNX2-201ENST00000379516 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
SNX2-201ENST00000379516 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 FAM196BA6NMK8 535 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 M0R2N6 131 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 RAD17O75943 681 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 ISM2Q6H9L7 571 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
SNX2-201ENST00000379516 PDILTQ8N807 584 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 PRMT6Q96LA8 375 aaPredicted RBP17.19■□□□□ 0.34
SNX2-201ENST00000379516 PIGSQ96S52 555 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 TUBE1Q9UJT0 475 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
SNX2-201ENST00000379516 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 CLCN1P35523 988 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 ATP2C1P98194 919 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 RSBN1LQ6PCB5 846 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 AOPEPQ8N6M6 819 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 TRIM5Q9C035 493 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 GPCPD1Q9NPB8 672 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 ZMYND12Q9H0C1 365 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
SNX2-201ENST00000379516 ZNF646O15015 1829 aaPredicted RBP17.18■□□□□ 0.34
SNX2-201ENST00000379516 VWA3AA6NCI4 1184 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 ELOA2Q8IYF1 753 aaPredicted RBP17.17■□□□□ 0.34
SNX2-201ENST00000379516 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 SMCO2A6NFE2 343 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 PSMD14O00487 310 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 FOXN1O15353 648 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 SOGA3Q5TF21 947 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 FOXP4Q8IVH2 680 aaPredicted RBP17.17■□□□□ 0.34
SNX2-201ENST00000379516 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
SNX2-201ENST00000379516 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms