RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 SEC63Q9UGP8 760 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 FRMPD2Q68DX3 1309 aaPredicted RBP16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 MCM7P33993 719 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 RRP36Q96EU6 259 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 SPZ1Q9BXG8 430 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
RAB3IP-203ENST00000378809 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 SHMT1P34896 483 aa16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 HOOK1Q9UJC3 728 aaKnown RBP16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
RAB3IP-203ENST00000378809 CCDC194A0A1B0GVG4 234 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 TTLL1O95922 423 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 PDHBP11177 359 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 NAPAP54920 295 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 NLRP12P59046 1061 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 PTGDRQ13258 359 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 CCDC93Q567U6 631 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 DHX40Q8IX18 779 aaKnown RBP16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 DRC7Q8IY82 874 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 STXBP3O00186 592 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 METTL16Q86W50 562 aaKnown RBP16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 ZNF830Q96NB3 372 aaPredicted RBP16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
RAB3IP-203ENST00000378809 VWA3AA6NCI4 1184 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 YDJCA8MPS7 323 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 GOLGA6L6A8MZA4 724 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 NOVP48745 357 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 USP49Q70CQ1 688 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 DDTLA6NHG4 134 aaPredicted RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 DPEP1P16444 411 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 CFAP100Q494V2 611 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 CCDC12Q8WUD4 166 aaPredicted RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 PIGSQ96S52 555 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 EHD4Q9H223 541 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 GPCPD1Q9NPB8 672 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 FAM198AQ9UFP1 575 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 SERTAD1Q9UHV2 236 aa16.86■□□□□ 0.29
RAB3IP-203ENST00000378809 SCN9AQ15858 1988 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 FOXN1O15353 648 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 RAD21O60216 631 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 ZNF75DP51815 510 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 ASPRV1Q53RT3 343 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 SOGA3Q5TF21 947 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 GALNT17Q6IS24 598 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 EPSTI1Q96J88 318 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 IDI2Q9BXS1 227 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 TTC12Q9H892 705 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 ZNF277Q9NRM2 450 aaPredicted RBP16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 PCDHA6Q9UN73 950 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 PCDHA8Q9Y5H6 950 aa16.85■□□□□ 0.29
RAB3IP-203ENST00000378809 RAD17O75943 681 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 POSTNQ15063 836 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 DHX58Q96C10 678 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 TUBE1Q9UJT0 475 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 MORC2Q9Y6X9 1032 aaPredicted RBP16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 PLA2G4DQ86XP0 818 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 CCDC17Q96LX7 622 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 DNAJC18Q9H819 358 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 PCDHA5Q9Y5H7 936 aa16.84■□□□□ 0.29
RAB3IP-203ENST00000378809 SMCO2A6NFE2 343 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 INF2Q27J81 1249 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 DAGLBQ8NCG7 672 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 SLC16A10Q8TF71 515 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
RAB3IP-203ENST00000378809 GNA11P29992 359 aa16.82■□□□□ 0.28
RAB3IP-203ENST00000378809 TPM4P67936 248 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms