RNA–Protein interactions for RNA: ENST00000378600.7

DDB2-202, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-202ENST00000378600 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
DDB2-202ENST00000378600 PRPF38AQ8NAV1 312 aaKnown RBP13.36□□□□□ -0.27
DDB2-202ENST00000378600 CD99L2Q8TCZ2 262 aa13.36□□□□□ -0.27
DDB2-202ENST00000378600 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
DDB2-202ENST00000378600 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
DDB2-202ENST00000378600 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
DDB2-202ENST00000378600 SLC1A4P43007 532 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 PSMC4P43686 418 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 ERVK-24P63145 666 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 FAM160B2Q86V87 743 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 LRRC47Q8N1G4 583 aaKnown RBP13.35□□□□□ -0.27
DDB2-202ENST00000378600 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 ADAMTS5Q9UNA0 930 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 TRIM17Q9Y577 477 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 TNKSO95271 1327 aa13.35□□□□□ -0.27
DDB2-202ENST00000378600 ZSWIM8A7E2V4 1837 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 FMNL1O95466 1100 aaPredicted RBP13.34□□□□□ -0.27
DDB2-202ENST00000378600 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
DDB2-202ENST00000378600 MAPK4P31152 587 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 MCM5P33992 734 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 COPB2P35606 906 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 STAT2P52630 851 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
DDB2-202ENST00000378600 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
DDB2-202ENST00000378600 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 COA7Q96BR5 231 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 SLF1Q9BQI6 1058 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 KAT14Q9H8E8 782 aa13.34□□□□□ -0.27
DDB2-202ENST00000378600 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
DDB2-202ENST00000378600 HSPA4P34932 840 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
DDB2-202ENST00000378600 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
DDB2-202ENST00000378600 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
DDB2-202ENST00000378600 PNMA1Q8ND90 353 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 ZKSCAN3Q9BRR0 538 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
DDB2-202ENST00000378600 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 VWA5AO00534 786 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 IFIT3O14879 490 aaKnown RBP13.32□□□□□ -0.28
DDB2-202ENST00000378600 ATP2A1O14983 1001 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 ZBED4O75132 1171 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SLC25A27O95847 323 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SNHG28P0DPA3 235 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 PDHBP11177 359 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 MCCP23508 829 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 OAZ1P54368 228 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SEC23AQ15436 765 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 CYB5R4Q7L1T6 521 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
DDB2-202ENST00000378600 TNS4Q8IZW8 715 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 KCNB2Q92953 911 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 MCOLN1Q9GZU1 580 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SPATC1LQ9H0A9 340 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 PNMA2Q9UL42 364 aa13.32□□□□□ -0.28
DDB2-202ENST00000378600 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
DDB2-202ENST00000378600 MYH6P13533 1939 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 ZNFX1Q9P2E3 1918 aaKnown RBP13.31□□□□□ -0.28
DDB2-202ENST00000378600 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 STRNO43815 780 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 CNMDO75829 334 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 WTAPQ15007 396 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 Q3C1V9 767 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 SOCS4Q8WXH5 440 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
DDB2-202ENST00000378600 MROH8Q9H579 483 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
DDB2-202ENST00000378600 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
DDB2-202ENST00000378600 DOCK3Q8IZD9 2030 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 PSMA5P28066 241 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 LIFRP42702 1097 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 IKQ13123 557 aaPredicted RBP13.3□□□□□ -0.28
DDB2-202ENST00000378600 IRF5Q13568 498 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 RIOX2Q8IUF8 465 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 NKX2-3Q8TAU0 364 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 IGDCC4Q8TDY8 1250 aa13.3□□□□□ -0.28
DDB2-202ENST00000378600 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms