RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
TPM2-204ENST00000378300 PAPPA2Q9BXP8 1791 aa16.35■□□□□ 0.21
TPM2-204ENST00000378300 BRD1O95696 1058 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 VGLL4Q14135 290 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 OTOFQ9HC10 1997 aa16.34■□□□□ 0.21
TPM2-204ENST00000378300 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.21
TPM2-204ENST00000378300 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.21
TPM2-204ENST00000378300 SLC16A2P36021 539 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 SLC1A4P43007 532 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 MAP3K9P80192 1104 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 PKN1Q16512 942 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 ALG1Q9BT22 464 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.21
TPM2-204ENST00000378300 ZNF408Q9H9D4 720 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 STK36Q9NRP7 1315 aa16.33■□□□□ 0.21
TPM2-204ENST00000378300 NF2P35240 595 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 NUCB2P80303 420 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 NOL9Q5SY16 702 aaKnown RBP16.33■□□□□ 0.2
TPM2-204ENST00000378300 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 CHAMP1Q96JM3 812 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
TPM2-204ENST00000378300 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
TPM2-204ENST00000378300 PRPF3O43395 683 aaKnown RBP16.32■□□□□ 0.2
TPM2-204ENST00000378300 PDCP20941 246 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 GNAQP50148 359 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 SPP2Q13103 211 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
TPM2-204ENST00000378300 DCAF4Q8WV16 495 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
TPM2-204ENST00000378300 FEZ1Q99689 392 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 VCPKMTQ9H867 229 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 MYH6P13533 1939 aa16.32■□□□□ 0.2
TPM2-204ENST00000378300 DEXIO95424 95 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
TPM2-204ENST00000378300 MCM4P33991 863 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 MTMR2Q13614 643 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 GMCL1Q96IK5 515 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 IREB2P48200 963 aaKnown RBP16.31■□□□□ 0.2
TPM2-204ENST00000378300 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
TPM2-204ENST00000378300 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
TPM2-204ENST00000378300 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 C8orf76Q96K31 380 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
TPM2-204ENST00000378300 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
TPM2-204ENST00000378300 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 H3BQV1 296 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 BMP3P12645 472 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 ADGRF4Q8IZF3 695 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 PIGSQ96S52 555 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 KIAA1683Q9H0B3 1180 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
TPM2-204ENST00000378300 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
TPM2-204ENST00000378300 KRT40Q6A162 431 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
TPM2-204ENST00000378300 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
TPM2-204ENST00000378300 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 VPS54Q9P1Q0 977 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 CSADQ9Y600 493 aa16.29■□□□□ 0.2
TPM2-204ENST00000378300 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 ITGBL1O95965 494 aaPredicted RBP16.28■□□□□ 0.2
TPM2-204ENST00000378300 F13A1P00488 732 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
TPM2-204ENST00000378300 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 WASF1Q92558 559 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 SCG2P13521 617 aa16.28■□□□□ 0.2
TPM2-204ENST00000378300 BACE1P56817 501 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms