RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PPP4R1Q8TF05 950 aa18■□□□□ 0.47
RGP1-201ENST00000378078 RPS6KB1P23443 525 aa18■□□□□ 0.47
RGP1-201ENST00000378078 PEX26Q7Z412 305 aa18■□□□□ 0.47
RGP1-201ENST00000378078 MAP3K5Q99683 1374 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 MTX1Q13505 466 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 ZNF467Q7Z7K2 595 aaPredicted RBP17.99■□□□□ 0.47
RGP1-201ENST00000378078 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 GPKOWQ92917 476 aaPredicted RBP eCLIP17.99■□□□□ 0.47
RGP1-201ENST00000378078 EEF2KMTQ96G04 330 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 ANGPTL3Q9Y5C1 460 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 TNNC2P02585 160 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 DBNDD2Q9BQY9 259 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 PDE8AO60658 829 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 ZAP70P43403 619 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 HACD3Q9P035 362 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 MARK3P27448 753 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 NKX1-1Q15270 411 aaPredicted RBP17.99■□□□□ 0.47
RGP1-201ENST00000378078 MMEL1Q495T6 779 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 RAB20Q9NX57 234 aa17.99■□□□□ 0.47
RGP1-201ENST00000378078 DENND2CQ68D51 928 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 PNMA8AQ86V59 439 aaPredicted RBP17.98■□□□□ 0.47
RGP1-201ENST00000378078 TNNI3KQ59H18 835 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 ACBD5Q5T8D3 534 aaPredicted RBP17.98■□□□□ 0.47
RGP1-201ENST00000378078 FPGT-TNNI3KV9GXZ4 949 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 SMCO2A6NFE2 343 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 KCNQ4P56696 695 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 FLOT1O75955 427 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 TMOD1P28289 359 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 SNAP25P60880 206 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
RGP1-201ENST00000378078 HABP4Q5JVS0 413 aaKnown RBP17.98■□□□□ 0.47
RGP1-201ENST00000378078 NAA35Q5VZE5 725 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 BRAPQ7Z569 592 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 SPECC1L-ADORA2AF8WAN1 911 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 MYL5Q02045 173 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 VWA3BQ502W6 1294 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 LMCD1Q9NZU5 365 aa17.98■□□□□ 0.47
RGP1-201ENST00000378078 S100BP04271 92 aaPredicted RBP17.97■□□□□ 0.47
RGP1-201ENST00000378078 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 KRT3P12035 628 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 ADCY8P40145 1251 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
RGP1-201ENST00000378078 RAB3IPQ96QF0 476 aaPredicted RBP17.97■□□□□ 0.47
RGP1-201ENST00000378078 CARD6Q9BX69 1037 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
RGP1-201ENST00000378078 ANO1Q5XXA6 986 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 NVLO15381 856 aaKnown RBP17.97■□□□□ 0.47
RGP1-201ENST00000378078 OPHN1O60890 802 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 PDE6AP16499 860 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 MAP7Q14244 749 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
RGP1-201ENST00000378078 SLC9C1Q4G0N8 1177 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 DPH5Q9H2P9 285 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 HELLSQ9NRZ9 838 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 TAOK1Q7L7X3 1001 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 NUB1Q9Y5A7 615 aa17.97■□□□□ 0.47
RGP1-201ENST00000378078 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 PRIMPOLQ96LW4 560 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 CCDC68Q9H2F9 335 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 KIAA1841Q6NSI8 718 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 GDAP1Q8TB36 358 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 SYNDIG1Q9H7V2 258 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 GCP02774 474 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 MFSD14BQ5SR56 506 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 ANKRD44Q8N8A2 993 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 PI4K2BQ8TCG2 481 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 IFT20Q8IY31 132 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 SNX1Q13596 522 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 ATP6V1E2Q96A05 226 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
RGP1-201ENST00000378078 PLEKHG3A1L390 1219 aa17.96■□□□□ 0.46
RGP1-201ENST00000378078 GYG1P46976 350 aa17.96■□□□□ 0.46
RGP1-201ENST00000378078 OTUD7AQ8TE49 926 aaPredicted RBP17.96■□□□□ 0.46
RGP1-201ENST00000378078 PANK4Q9NVE7 773 aa17.96■□□□□ 0.46
RGP1-201ENST00000378078 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 DKC1O60832 514 aaKnown RBP eCLIP17.95■□□□□ 0.46
RGP1-201ENST00000378078 DYNLT1P63172 113 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 ANGPTL8Q6UXH0 198 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 SUFUQ9UMX1 484 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 FRMD3A2A2Y4 597 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 NONOQ15233 471 aaKnown RBP eCLIP17.95■□□□□ 0.46
RGP1-201ENST00000378078 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 ZNF654Q8IZM8 581 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 WDR48Q8TAF3 677 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 ATP2A3Q93084 1043 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
RGP1-201ENST00000378078 HOXC9P31274 260 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 MORC4Q8TE76 937 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 PGBD1Q96JS3 809 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 H7C0C1 242 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 ATP5OP48047 213 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms