RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MRPL47Q9HD33 250 aaKnown RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 FOXD4L1Q9NU39 408 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ANAPC4Q9UJX5 808 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 KIF11P52732 1056 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 OVOS2A0A0J9YW53 1432 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 OVOS2Q6IE36 1432 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 PFASO15067 1338 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 EPHB4P54760 987 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 TTC13Q8NBP0 860 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 CNOT7Q9UIV1 285 aaKnown RBP5.46□□□□□ -1.53
PCDH9-201ENST00000377861 POLR2BP30876 1174 aaKnown RBP5.46□□□□□ -1.53
PCDH9-201ENST00000377861 MTA1Q13330 715 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 KIF9Q9HAQ2 790 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 PPP1R18Q6NYC8 613 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 PDZD4Q76G19 769 aaPredicted RBP5.46□□□□□ -1.53
PCDH9-201ENST00000377861 TMEM63CQ9P1W3 806 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 MAP3K19Q56UN5 1328 aa5.46□□□□□ -1.53
PCDH9-201ENST00000377861 CRELD2Q6UXH1 353 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 TUBE1Q9UJT0 475 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 OVOS2A0A0G2JMS6 1433 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 PPP2R2CQ9Y2T4 447 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 ALDH1B1P30837 517 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 P4HA1P13674 534 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 SURF1Q15526 300 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 OTUD6AQ7L8S5 288 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 FMR1NBQ8N0W7 255 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 FAXDC2Q96IV6 333 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 RAI14Q9P0K7 980 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 SIRT2Q8IXJ6 389 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 DNAJC8O75937 253 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 FOXP4Q8IVH2 680 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 MYCBPQ99417 103 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 LMAN1P49257 510 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 RNF216Q9NWF9 866 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 PTPRUQ92729 1446 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 NDE1Q9NXR1 346 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 ADRA2BP18089 450 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 RIOK3O14730 519 aaKnown RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 MECOMQ03112 1051 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 CCSER1Q9C0I3 900 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 PPME1Q9Y570 386 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 PCF11O94913 1555 aaKnown RBP5.46□□□□□ -1.54
PCDH9-201ENST00000377861 NEURL1BA8MQ27 555 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 CHPF2Q9P2E5 772 aa5.46□□□□□ -1.54
PCDH9-201ENST00000377861 SUN1O94901 812 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 RESP18Q5W5W9 173 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 UBE3BQ7Z3V4 1068 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 WDR11Q9BZH6 1224 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 PLAGL2Q9UPG8 496 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 MED23Q9ULK4 1368 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 FMNL1O95466 1100 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SERPING1P05155 500 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TMC6Q7Z403 805 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 PCGF5Q86SE9 256 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SLITRK6Q9H5Y7 841 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 IFNKQ9P0W0 207 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TSPY2A6NKD2 308 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 NEDD9Q14511 834 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 OGFOD1Q8N543 542 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 E7EWF7 191 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 FGAP02671 866 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 IRX1P78414 480 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ARMC3Q5W041 872 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 CCDC89Q8N998 374 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF569Q5MCW4 686 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 NUP133Q8WUM0 1156 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 PNPLA7Q6ZV29 1317 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 EPB41P11171 864 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 PAX3P23760 479 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 FYB2Q5VWT5 728 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 VSTM4Q8IW00 320 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 AFAP1L1Q8TED9 768 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 UBN1Q9NPG3 1134 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 MAGEB6P1A0A0J9YX57 407 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 COBLL1Q53SF7 1204 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 MMADHCQ9H3L0 296 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 MAP2K2P36507 400 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TAP1Q03518 808 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 NKX1-1Q15270 411 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 LIN9Q5TKA1 542 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SPINK5Q9NQ38 1064 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 ZRANB1Q9UGI0 708 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 FERP16591 822 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TRIM47Q96LD4 638 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 DRC3Q9H069 523 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SKIP12755 728 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 FBF1Q8TES7 1133 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TTC25Q96NG3 672 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 PSMD14O00487 310 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 NAA20P61599 178 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 DZIP3Q86Y13 1208 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 VIMP08670 466 aaKnown RBP5.45□□□□□ -1.54
PCDH9-201ENST00000377861 SLC8A3P57103 927 aa5.45□□□□□ -1.54
PCDH9-201ENST00000377861 TBC1D31Q96DN5 1066 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms