RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 RPS6KA2Q15349 733 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 TBC1D1Q86TI0 1168 aaPredicted RBP18.38■□□□□ 0.53
ATXN2-201ENST00000377617 PCDHA7Q9UN72 937 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 SH3BP5O60239 455 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 DTNBP1Q96EV8 351 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
ATXN2-201ENST00000377617 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
ATXN2-201ENST00000377617 MAN1A1P33908 653 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 TMTC3Q6ZXV5 915 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 IRAK4Q9NWZ3 460 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 U2AF1L4Q8WU68 220 aaKnown RBP18.37■□□□□ 0.53
ATXN2-201ENST00000377617 BUB1O43683 1085 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 ATP5HO75947 161 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 CASP14P31944 242 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 KBTBD3Q8NAB2 608 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 KRT25Q7Z3Z0 450 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 MPHOSPH6Q99547 160 aaKnown RBP18.37■□□□□ 0.53
ATXN2-201ENST00000377617 FGFR1OP2Q9NVK5 253 aa18.37■□□□□ 0.53
ATXN2-201ENST00000377617 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 SRLQ86TD4 932 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 DAAM1Q9Y4D1 1078 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 TTC4O95801 387 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 VPS41P49754 854 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 KRT80Q6KB66 452 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 NRBF2Q96F24 287 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 RANBP1P43487 201 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 STRN3Q13033 797 aa18.36■□□□□ 0.53
ATXN2-201ENST00000377617 ANKRD65E5RJM6 399 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 EHHADHQ08426 723 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 CUL4AQ13619 759 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 UHMK1Q8TAS1 419 aaKnown RBP18.35■□□□□ 0.53
ATXN2-201ENST00000377617 EXOC7Q9UPT5 735 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 ENC1O14682 589 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 KRT3P12035 628 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 PLCG2P16885 1265 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 IFNB1P01574 187 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 CHGBP05060 677 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 ATF2P15336 505 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 PCYT1AP49585 367 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 COPB1P53618 953 aaKnown RBP18.35■□□□□ 0.53
ATXN2-201ENST00000377617 SMTNP53814 917 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 NONOQ15233 471 aaKnown RBP eCLIP18.35■□□□□ 0.536e-8■■■■□ 23
ATXN2-201ENST00000377617 CASC4Q6P4E1 433 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 SNX29Q8TEQ0 813 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 SATB2Q9UPW6 733 aa18.35■□□□□ 0.53
ATXN2-201ENST00000377617 BZW2Q9Y6E2 419 aaKnown RBP18.35■□□□□ 0.53
ATXN2-201ENST00000377617 PFKFB2O60825 505 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 TXKP42681 527 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 GRAMD4Q6IC98 578 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 CABP7Q86V35 215 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 DACT3Q96B18 629 aaPredicted RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 GSDMAQ96QA5 445 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 LSM14BQ9BX40 385 aaKnown RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 MCM9Q9NXL9 1143 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 ZMYND10O75800 440 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 SLC12A2P55011 1212 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 GNPTABQ3T906 1256 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 KMT5BQ4FZB7 885 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 DPH6Q7L8W6 267 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 STAMQ92783 540 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 RTEL1Q9NZ71 1219 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 GTPBP6O43824 516 aaPredicted RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 HSPA6P17066 643 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 NDUFA8P51970 172 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 LRGUKQ96M69 825 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 OSBPL9Q96SU4 736 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 PACSIN2Q9UNF0 486 aaPredicted RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 NOSTRINQ8IVI9 506 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 TRIML2Q8N7C3 387 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 NOVA2Q9UNW9 492 aaKnown RBP18.34■□□□□ 0.53
ATXN2-201ENST00000377617 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
ATXN2-201ENST00000377617 RASSF10A6NK89 507 aa18.33■□□□□ 0.53
ATXN2-201ENST00000377617 XRCC5P13010 732 aaKnown RBP18.33■□□□□ 0.53
ATXN2-201ENST00000377617 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.53
ATXN2-201ENST00000377617 INPP1P49441 399 aa18.33■□□□□ 0.53
ATXN2-201ENST00000377617 PLS1Q14651 629 aa18.33■□□□□ 0.53
ATXN2-201ENST00000377617 RPGRQ92834 1020 aaKnown RBP18.33■□□□□ 0.53
ATXN2-201ENST00000377617 GFM2Q969S9 779 aaKnown RBP18.33■□□□□ 0.53
ATXN2-201ENST00000377617 C6orf229H3BNL8 230 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 PDE6CP51160 858 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 LMNB2Q03252 620 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 CEP70Q8NHQ1 597 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 MRPL46Q9H2W6 279 aaKnown RBP18.33■□□□□ 0.52
ATXN2-201ENST00000377617 PGRMC1O00264 195 aaKnown RBP18.33■□□□□ 0.52
ATXN2-201ENST00000377617 MAPK13O15264 365 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 EXOC3O60645 756 aa18.33■□□□□ 0.52
ATXN2-201ENST00000377617 DHX9Q08211 1270 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms