RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TRIM49BA6NDI0 452 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 USP17L8P0C7I0 530 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 CTAGE1Q96RT6 745 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 ARFGAP3Q9NP61 516 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
SF1-203ENST00000377387 CALM1P0DP23 149 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 CALM2P0DP24 149 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 CALM3P0DP25 149 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 RSRC2Q7L4I2 434 aaKnown RBP20.49■□□□□ 0.87
SF1-203ENST00000377387 SLC35F6Q8N357 371 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 SLF1Q9BQI6 1058 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 LRP5O75197 1615 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 PBX1P40424 430 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 CHMP4BP1P59074 171 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 STAG2Q8N3U4 1231 aa20.49■□□□□ 0.87
SF1-203ENST00000377387 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
SF1-203ENST00000377387 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 BMP15O95972 392 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 ERVK-24P63145 666 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 PAK1Q13153 545 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 E2F4Q16254 413 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
SF1-203ENST00000377387 DDAH1O94760 285 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 RHOXF2BP0C7M4 288 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 OAS2P29728 719 aaKnown RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 RHOXF2Q9BQY4 288 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 CICQ96RK0 1608 aaPredicted RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 KCNJ18B7U540 433 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 KRT9P35527 623 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 STAT6P42226 847 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 PRCPP42785 496 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 COPB1P53618 953 aaKnown RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 UBXN1Q04323 297 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 KCNJ12Q14500 433 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 PDXDC2PQ6P474 469 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 CNGA4Q8IV77 575 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 TFR2Q9UP52 801 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 MYH8P13535 1937 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 MYH13Q9UKX3 1938 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 ARAP2Q8WZ64 1704 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 TFAP4Q01664 338 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
SF1-203ENST00000377387 RABGGTAQ92696 567 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 CHP1Q99653 195 aa20.47■□□□□ 0.87
SF1-203ENST00000377387 RPN1P04843 607 aaKnown RBP20.46■□□□□ 0.87
SF1-203ENST00000377387 ST5P78524 1137 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 LINC00116Q8NCU8 138 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 NEK11Q8NG66 645 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 TRERF1Q96PN7 1200 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 TRIM10Q9UDY6 481 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 TXLNAP40222 546 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 MCM6Q14566 821 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 CPVLQ9H3G5 476 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.46■□□□□ 0.87
SF1-203ENST00000377387 ROBO1Q9Y6N7 1651 aa20.46■□□□□ 0.87
SF1-203ENST00000377387 HIBADHP31937 336 aaKnown RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 PFKFB3Q16875 520 aaPredicted RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 RASGRP2Q7LDG7 609 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 NAA15Q9BXJ9 866 aaKnown RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 KAT14Q9H8E8 782 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 ABHD10Q9NUJ1 306 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 TCP11X2Q5H9J9 407 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 SRGAP1Q7Z6B7 1085 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 SUGCTQ9HAC7 445 aa20.45■□□□□ 0.86
SF1-203ENST00000377387 RNF216Q9NWF9 866 aaPredicted RBP20.45■□□□□ 0.86
SF1-203ENST00000377387 CTAGE9A4FU28 777 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 USP17L3A6NCW0 530 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 USP17L4A6NCW7 530 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 LONRF2Q1L5Z9 754 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 TYW1BQ6NUM6 668 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 USP17L1Q7RTZ2 530 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 BLIDQ8IZY5 108 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 GUCA1BQ9UMX6 200 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 PMS1P54277 932 aaKnown RBP20.44■□□□□ 0.86
SF1-203ENST00000377387 RCSD1Q6JBY9 416 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 ANKRD20A12PQ8NF67 263 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 DUOX1Q9NRD9 1551 aa20.44■□□□□ 0.86
SF1-203ENST00000377387 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
SF1-203ENST00000377387 INF2Q27J81 1249 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 HEATR3Q7Z4Q2 680 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 TMEM60Q9H2L4 133 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 RWDD2AQ9UIY3 292 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 ZNF658Q5TYW1 1059 aaPredicted RBP20.43■□□□□ 0.86
SF1-203ENST00000377387 FBXO33Q7Z6M2 555 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 AMIGO3Q86WK7 504 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
SF1-203ENST00000377387 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
SF1-203ENST00000377387 PNKPQ96T60 521 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms