RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 VCPKMTQ9H867 229 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 KLRF2D3W0D1 207 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 CTDNEP1O95476 244 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 GNAQP50148 359 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 USP14P54578 494 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 DGKZQ13574 1117 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 ASPRV1Q53RT3 343 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 TMTC3Q6ZXV5 915 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 ERO1BQ86YB8 467 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
CBWD3-203ENST00000377344 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
CBWD3-203ENST00000377344 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
CBWD3-203ENST00000377344 SNHG28P0DPA3 235 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 BMP3P12645 472 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 GJB2P29033 226 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 BACE1P56817 501 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 PPATQ06203 517 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 ZNF543Q08ER8 600 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 IKQ13123 557 aaPredicted RBP15.05■□□□□ -0
CBWD3-203ENST00000377344 KIAA1755Q5JYT7 1200 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ -0
CBWD3-203ENST00000377344 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ -0
CBWD3-203ENST00000377344 OPTNQ96CV9 577 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 GMCL1Q96IK5 515 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 AFG3L2Q9Y4W6 797 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 TRPM7Q96QT4 1865 aa15.05■□□□□ -0
CBWD3-203ENST00000377344 SPDYE5A6NIY4 337 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 IFNAR1P17181 557 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 HMGCS2P54868 508 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 HUNKP57058 714 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 SSRP1Q08945 709 aaKnown RBP15.04■□□□□ -0
CBWD3-203ENST00000377344 NTRK3Q16288 839 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 FAM83BQ5T0W9 1011 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 SRBD1Q8N5C6 995 aaKnown RBP15.04■□□□□ -0
CBWD3-203ENST00000377344 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 PIBF1Q8WXW3 757 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 CPVLQ9H3G5 476 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 PASKQ96RG2 1323 aa15.04■□□□□ -0
CBWD3-203ENST00000377344 UNCXA6NJT0 531 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 C19orf81C9J6K1 198 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 TMEM232C9JQI7 657 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 HMGN5P82970 282 aaKnown RBP15.03■□□□□ -0
CBWD3-203ENST00000377344 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
CBWD3-203ENST00000377344 TTBK2Q6IQ55 1244 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
CBWD3-203ENST00000377344 NBPF11Q86T75 865 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 LPAR1Q92633 364 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 LZTS2Q9BRK4 669 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 TMOD4Q9NZQ9 345 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 ORC3Q9UBD5 711 aaPredicted RBP15.03■□□□□ -0
CBWD3-203ENST00000377344 PHIPQ8WWQ0 1821 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 IRF6O14896 467 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 SLC16A2P36021 539 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
CBWD3-203ENST00000377344 VAT1LQ9HCJ6 419 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
CBWD3-203ENST00000377344 hCG_1642624A0A1W2PR95 340 aa15.02■□□□□ -0
CBWD3-203ENST00000377344 FMNL1O95466 1100 aaPredicted RBP15.02■□□□□ -0
CBWD3-203ENST00000377344 PPIL2Q13356 520 aa15.02■□□□□ -0
CBWD3-203ENST00000377344 TANGO6Q9C0B7 1094 aa15.02■□□□□ -0
CBWD3-203ENST00000377344 KIF3AQ9Y496 699 aa15.02■□□□□ -0
CBWD3-203ENST00000377344 V9GY48 417 aaPredicted RBP15.02■□□□□ -0
CBWD3-203ENST00000377344 CNTNAP5Q8WYK1 1306 aa15.02□□□□□ -0.01
CBWD3-203ENST00000377344 WDR46O15213 610 aaKnown RBP15.01□□□□□ -0.01
CBWD3-203ENST00000377344 VCAM1P19320 739 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 FOSBP53539 338 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 FUT2Q10981 343 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 MKRN3Q13064 507 aaKnown RBP15.01□□□□□ -0.01
CBWD3-203ENST00000377344 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 RNF26Q9BY78 433 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-203ENST00000377344 FDPSP14324 419 aaKnown RBP15.01□□□□□ -0.01
CBWD3-203ENST00000377344 STAT2P52630 851 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 FSTL1Q12841 308 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
CBWD3-203ENST00000377344 ABT1Q9ULW3 272 aaKnown RBP15.01□□□□□ -0.01
CBWD3-203ENST00000377344 CXCL11O14625 94 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 PRPF3O43395 683 aaKnown RBP15□□□□□ -0.01
CBWD3-203ENST00000377344 CYTH3O43739 400 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 DEXIO95424 95 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 RRP36Q96EU6 259 aaKnown RBP15□□□□□ -0.01
CBWD3-203ENST00000377344 WNK4Q96J92 1243 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 RPAP3Q9H6T3 665 aaPredicted RBP15□□□□□ -0.01
CBWD3-203ENST00000377344 SEC63Q9UGP8 760 aaKnown RBP15□□□□□ -0.01
CBWD3-203ENST00000377344 STK36Q9NRP7 1315 aa15□□□□□ -0.01
CBWD3-203ENST00000377344 TMEM88BA6NKF7 163 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SMARCA1P28370 1054 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 GJA5P36382 358 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SLC35G1Q2M3R5 365 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 LARP1BQ659C4 914 aaKnown RBP14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SAPCD2Q86UD0 394 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 CHURC1Q8WUH1 139 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 WASF1Q92558 559 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms