RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 PPP2R3BQ9Y5P8 575 aa9.05□□□□□ -0.96
SSX9-201ENST00000376909 MYH1P12882 1939 aa9.05□□□□□ -0.96
SSX9-201ENST00000376909 DICER1Q9UPY3 1922 aaKnown RBP9.05□□□□□ -0.96
SSX9-201ENST00000376909 ECM29Q5VYK3 1845 aa9.05□□□□□ -0.96
SSX9-201ENST00000376909 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
SSX9-201ENST00000376909 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
SSX9-201ENST00000376909 SBF1O95248 1867 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 STX6O43752 255 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 GDF11O95390 407 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 BRD1O95696 1058 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 IFNAR1P17181 557 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 SYT1P21579 422 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 EPHX2P34913 555 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 ATP2B2Q01814 1243 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 MAP3K10Q02779 954 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 SSRP1Q08945 709 aaKnown RBP9.04□□□□□ -0.96
SSX9-201ENST00000376909 NTRK3Q16288 839 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 DCAF15Q66K64 600 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 USP50Q70EL3 339 aaPredicted RBP9.04□□□□□ -0.96
SSX9-201ENST00000376909 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
SSX9-201ENST00000376909 NYAP2Q9P242 653 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 ORC3Q9UBD5 711 aaPredicted RBP9.04□□□□□ -0.96
SSX9-201ENST00000376909 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
SSX9-201ENST00000376909 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 PPFIA3O75145 1194 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 FMNL1O95466 1100 aaPredicted RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 GH2P01242 217 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 FDPSP14324 419 aaKnown RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 GNAQP50148 359 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 ICA1Q05084 483 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 PKP1Q13835 747 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 RRP1BQ14684 758 aaKnown RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 GRM4Q14833 912 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 SEPT2Q15019 361 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 NBPF12Q5TAG4 269 aaPredicted RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 CLEC10AQ8IUN9 316 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 LRRC47Q8N1G4 583 aaKnown RBP9.03□□□□□ -0.96
SSX9-201ENST00000376909 PHKBQ93100 1093 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 MKL1Q969V6 931 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 SLC26A6Q9BXS9 759 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 STK36Q9NRP7 1315 aa9.03□□□□□ -0.96
SSX9-201ENST00000376909 VPS37CA5D8V6 355 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 SPDYE16A6NNV3 312 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 H3BQV1 296 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 PLEKHA8P1O95397 391 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 GUCY1A2P33402 732 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 CAP2P40123 477 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 FOSBP53539 338 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
SSX9-201ENST00000376909 AKAP17AQ02040 695 aaKnown RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 FOXD4L5Q5VV16 416 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 PRAMEF18Q5VWM3 479 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 TMTC3Q6ZXV5 915 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 SULF1Q8IWU6 871 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 FOXD4L4Q8WXT5 416 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 WASF1Q92558 559 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 TNPO1Q92973 898 aaKnown RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 LZTS2Q9BRK4 669 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.97
SSX9-201ENST00000376909 GINM1Q9NU53 330 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
SSX9-201ENST00000376909 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 PRPF3O43395 683 aaKnown RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 CTNND1O60716 968 aaKnown RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 DEXIO95424 95 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 ASNSP08243 561 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 PDHBP11177 359 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 JAG1P78504 1218 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 FUT2Q10981 343 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 EAPPQ56P03 285 aaPredicted RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 NBPF11Q86T75 865 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 PNMA8AQ86V59 439 aaPredicted RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 SIAH1Q8IUQ4 282 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 STAG2Q8N3U4 1231 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 RGS22Q8NE09 1264 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 C8orf76Q96K31 380 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 ALG1Q9BT22 464 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 RNF26Q9BY78 433 aaPredicted RBP9.01□□□□□ -0.97
SSX9-201ENST00000376909 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
SSX9-201ENST00000376909 SYNPO2Q9UMS6 1093 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms