RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 GRIN1Q05586 938 aa19.26■□□□□ 0.67
HLA-A-202ENST00000376806 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
HLA-A-202ENST00000376806 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
HLA-A-202ENST00000376806 CCDC148Q8NFR7 591 aa19.26■□□□□ 0.67
HLA-A-202ENST00000376806 IDI2Q9BXS1 227 aa19.26■□□□□ 0.67
HLA-A-202ENST00000376806 COL4A5P29400 1685 aa19.26■□□□□ 0.67
HLA-A-202ENST00000376806 WNT7AO00755 349 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 CACNB3P54284 484 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 TTC38Q5R3I4 469 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 ZSCAN30Q86W11 494 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 KCNH3Q9ULD8 1083 aa19.25■□□□□ 0.67
HLA-A-202ENST00000376806 A0A087WWV3 80 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 STXBP3O00186 592 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 TRAPPC10P48553 1259 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 PLCB2Q00722 1185 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 TYW1BQ6NUM6 668 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 ZFPM1Q8IX07 1006 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 RTKN2Q8IZC4 609 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 FAM177A1Q8N128 213 aaPredicted RBP19.24■□□□□ 0.67
HLA-A-202ENST00000376806 PSMD1Q99460 953 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 FAM13BQ9NYF5 915 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 FAM198AQ9UFP1 575 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 PCDHA4Q9UN74 947 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
HLA-A-202ENST00000376806 SMARCA1P28370 1054 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 IQCB1Q15051 598 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 PIK3AP1Q6ZUJ8 805 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 HEATR3Q7Z4Q2 680 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 CEP57L1Q8IYX8 460 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 DAGLBQ8NCG7 672 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 SYT17Q9BSW7 474 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
HLA-A-202ENST00000376806 CPVLQ9H3G5 476 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 PIM2Q9P1W9 311 aa19.24■□□□□ 0.67
HLA-A-202ENST00000376806 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
HLA-A-202ENST00000376806 PTMAP06454 111 aaKnown RBP19.23■□□□□ 0.67
HLA-A-202ENST00000376806 PDHBP11177 359 aa19.23■□□□□ 0.67
HLA-A-202ENST00000376806 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
HLA-A-202ENST00000376806 DNAJC18Q9H819 358 aa19.23■□□□□ 0.67
HLA-A-202ENST00000376806 COL2A1P02458 1487 aaPredicted RBP19.23■□□□□ 0.67
HLA-A-202ENST00000376806 TTLL1O95922 423 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 TCP10Q12799 353 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 ZRSR1Q15695 479 aaKnown RBP19.22■□□□□ 0.67
HLA-A-202ENST00000376806 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 CSRNP2Q9H175 543 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 M0R2N6 131 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
HLA-A-202ENST00000376806 ZNF174Q15697 407 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 CFAP100Q494V2 611 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 ASPRV1Q53RT3 343 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 GALNT17Q6IS24 598 aa19.22■□□□□ 0.67
HLA-A-202ENST00000376806 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
HLA-A-202ENST00000376806 FER1L6Q2WGJ9 1857 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
HLA-A-202ENST00000376806 SNHG28P0DPA3 235 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 ATP2C1P98194 919 aaPredicted RBP19.21■□□□□ 0.67
HLA-A-202ENST00000376806 LONRF3Q496Y0 759 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 METTL16Q86W50 562 aaKnown RBP19.21■□□□□ 0.67
HLA-A-202ENST00000376806 CNNM3Q8NE01 707 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 FERMT2Q96AC1 680 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 CCDC17Q96LX7 622 aa19.21■□□□□ 0.67
HLA-A-202ENST00000376806 NAT10Q9H0A0 1025 aaKnown RBP19.21■□□□□ 0.67
HLA-A-202ENST00000376806 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 GOLGA6L19H0YKK7 550 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 MPHOSPH10O00566 681 aaKnown RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 NLRP12P59046 1061 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 DPCR1Q3MIW9 517 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 SH3BP5LQ7L8J4 393 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 DHX40Q8IX18 779 aaKnown RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 ELOA2Q8IYF1 753 aaPredicted RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 TUBE1Q9UJT0 475 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 ATRNL1Q5VV63 1379 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 SLURP2P0DP57 97 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 PNOCQ13519 176 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 PPP4R3BQ5MIZ7 849 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 HOMER1Q86YM7 354 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 RASGRP4Q8TDF6 673 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 CCDC12Q8WUD4 166 aaPredicted RBP19.2■□□□□ 0.66
HLA-A-202ENST00000376806 RIOX1Q9H6W3 641 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 PI4KBQ9UBF8 816 aa19.2■□□□□ 0.66
HLA-A-202ENST00000376806 CCDC194A0A1B0GVG4 234 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 BIN1O00499 593 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 MSNP26038 577 aaKnown RBP19.19■□□□□ 0.66
HLA-A-202ENST00000376806 CLCN1P35523 988 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 NAPAP54920 295 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 PTGDRQ13258 359 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 RSBN1LQ6PCB5 846 aaPredicted RBP19.19■□□□□ 0.66
HLA-A-202ENST00000376806 ZSCAN29Q8IWY8 852 aaPredicted RBP19.19■□□□□ 0.66
HLA-A-202ENST00000376806 LARGE2Q8N3Y3 721 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 PIGSQ96S52 555 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 BPIFA3Q9BQP9 254 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms