RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 XBP1P17861 261 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 CCDC122Q5T0U0 273 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 SH3RF1Q7Z6J0 888 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 GOLGA5Q8TBA6 731 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 ESR2Q92731 530 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
SSH3-203ENST00000376757 SMARCAL1Q9NZC9 954 aa17.79■□□□□ 0.44
SSH3-203ENST00000376757 EPN1Q9Y6I3 576 aaPredicted RBP17.79■□□□□ 0.44
SSH3-203ENST00000376757 MYBL2P10244 700 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 SEC23AQ15436 765 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 CYP26C1Q6V0L0 522 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 CATIPQ7Z7H3 387 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 SRBD1Q8N5C6 995 aaKnown RBP17.78■□□□□ 0.44
SSH3-203ENST00000376757 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
SSH3-203ENST00000376757 RASSF4Q9H2L5 321 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 TTF2Q9UNY4 1162 aaKnown RBP17.78■□□□□ 0.44
SSH3-203ENST00000376757 RCCD1A6NED2 376 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 CYP2D6P10635 497 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 DNAJC21Q5F1R6 531 aaKnown RBP17.78■□□□□ 0.44
SSH3-203ENST00000376757 SRLQ86TD4 932 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
SSH3-203ENST00000376757 ATRNO75882 1429 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 MST1RQ04912 1400 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 NDUFA10O95299 355 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 DNA2P51530 1060 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 NPY5RQ15761 445 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 TMTC1Q8IUR5 882 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 MSANTD4Q8NCY6 345 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 CAGE1Q8TC20 777 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 LACRTQ9GZZ8 138 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 RAB21Q9UL25 225 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 MAGEB6P1A0A0J9YX57 407 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 B4DLN1 442 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 USP17L12C9JPN9 530 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 USP17L21D6R901 530 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 RNF40O75150 1001 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
SSH3-203ENST00000376757 MUM1L1Q5H9M0 696 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 IQUBQ8NA54 791 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 NAA15Q9BXJ9 866 aaKnown RBP17.77■□□□□ 0.44
SSH3-203ENST00000376757 RNF26Q9BY78 433 aaPredicted RBP17.77■□□□□ 0.44
SSH3-203ENST00000376757 EHD4Q9H223 541 aa17.77■□□□□ 0.44
SSH3-203ENST00000376757 COL18A1P39060 1754 aa17.77■□□□□ 0.43
SSH3-203ENST00000376757 KRT26Q7Z3Y9 468 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 CCDC24Q8N4L8 307 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 CPVLQ9H3G5 476 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
SSH3-203ENST00000376757 FUT2Q10981 343 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 KIAA1328Q86T90 577 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 RPN1P04843 607 aaKnown RBP17.76■□□□□ 0.43
SSH3-203ENST00000376757 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
SSH3-203ENST00000376757 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
SSH3-203ENST00000376757 C2orf54Q08AI8 447 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 IRF2BP1Q8IU81 584 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
SSH3-203ENST00000376757 CWC15Q9P013 229 aaKnown RBP17.76■□□□□ 0.43
SSH3-203ENST00000376757 CXCR5P32302 372 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 STAT6P42226 847 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 HSPA2P54652 639 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 CHRNDQ07001 517 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 EZH2Q15910 746 aaKnown RBP17.75■□□□□ 0.43
SSH3-203ENST00000376757 ZNF512BQ96KM6 892 aaPredicted RBP17.75■□□□□ 0.43
SSH3-203ENST00000376757 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
SSH3-203ENST00000376757 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 HERVK_113P62684 666 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 TROAPQ12815 778 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 E2F4Q16254 413 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 FAM205AQ6ZU69 1335 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
SSH3-203ENST00000376757 MYH6P13533 1939 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 PLEKP08567 350 aaPredicted RBP17.74■□□□□ 0.43
SSH3-203ENST00000376757 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
SSH3-203ENST00000376757 AMPD2Q01433 879 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 LUC7L2Q9Y383 392 aaKnown RBP17.74■□□□□ 0.43
SSH3-203ENST00000376757 MROH5Q6ZUA9 1318 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 PDE2AO00408 941 aaPredicted RBP17.74■□□□□ 0.43
SSH3-203ENST00000376757 ZPR1O75312 459 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 USP5P45974 858 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 PIP4K2BP78356 416 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 LRRC31Q6UY01 552 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 TMTC2Q8N394 836 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
SSH3-203ENST00000376757 BAZ2AQ9UIF9 1905 aaKnown RBP17.74■□□□□ 0.43
SSH3-203ENST00000376757 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 SLC7A5Q01650 507 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 WDR59Q6PJI9 974 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms