RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 FRMD3A2A2Y4 597 aa15.12■□□□□ 0.01
COL4A1-201ENST00000375820 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
COL4A1-201ENST00000375820 MLKLQ8NB16 471 aa15.12■□□□□ 0.01
COL4A1-201ENST00000375820 MLXIPQ9HAP2 919 aa15.12■□□□□ 0.01
COL4A1-201ENST00000375820 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
COL4A1-201ENST00000375820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.11■□□□□ 0.01
COL4A1-201ENST00000375820 NME8Q8N427 588 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 LLGL1Q15334 1064 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 TSNAXIP1Q2TAA8 658 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 CACYBPQ9HB71 228 aaKnown RBP15.11■□□□□ 0.01
COL4A1-201ENST00000375820 OATP04181 439 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 TRIM50Q86XT4 487 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 NPATQ14207 1427 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
COL4A1-201ENST00000375820 PPP1R2P41236 205 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 GADL1Q6ZQY3 521 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 CEP128Q6ZU80 1094 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 TMTC1Q8IUR5 882 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 CHMP6Q96FZ7 201 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 CARD14Q9BXL6 1004 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 K7ENM7 598 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 STAM2O75886 525 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 GSTA1P08263 222 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 GSTA2P09210 222 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 UBXN2AP68543 259 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 RUFY4Q6ZNE9 571 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
COL4A1-201ENST00000375820 UBE2Q2Q8WVN8 375 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
COL4A1-201ENST00000375820 GOLGA8FQ08AF8 430 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 GOLGA8DPQ0D2H9 430 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 SYCE1Q8N0S2 351 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 A0A1W2PP64 1363 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 KCNJ18B7U540 433 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 KRIT1O00522 736 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 KCNJ12Q14500 433 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 REXO1Q8N1G1 1221 aaKnown RBP15.1■□□□□ 0.01
COL4A1-201ENST00000375820 PPARAQ07869 468 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 LGSNQ5TDP6 509 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 A0A1B0GUA9 196 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 PPIP5K2O43314 1243 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 LPXNO60711 386 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 CCDC127Q96BQ5 260 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 CLIC6Q96NY7 704 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 ABCF3Q9NUQ8 709 aa15.1■□□□□ 0.01
COL4A1-201ENST00000375820 LIG4P49917 911 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 MUM1Q2TAK8 710 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 CHAMP1Q96JM3 812 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 VCXQ9H320 206 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 GNGT1P63211 74 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 ME3Q16798 604 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 TMTC4Q5T4D3 741 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 TTBK2Q6IQ55 1244 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 LPIN2Q92539 896 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 SLC39A2Q9NP94 309 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 OPHN1O60890 802 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 SMIM24O75264 130 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 NR1I2O75469 434 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 MORC3Q14149 939 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 Q3C1V9 767 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 GABPB2Q8TAK5 448 aaPredicted RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 GYG1P46976 350 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 MAP7Q14244 749 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 DLGAP5Q15398 846 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 XKR9Q5GH70 373 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 PHLDB2Q86SQ0 1253 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 MCUQ8NE86 351 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 WHAMMQ8TF30 809 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 POLR2FP61218 127 aaKnown RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 IP6K1Q92551 441 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
COL4A1-201ENST00000375820 PANK4Q9NVE7 773 aa15.09■□□□□ 0.01
COL4A1-201ENST00000375820 SLC12A1Q13621 1099 aa15.08■□□□□ 0.01
COL4A1-201ENST00000375820 PLCB1Q9NQ66 1216 aa15.08■□□□□ 0.01
COL4A1-201ENST00000375820 FNDC3AQ9Y2H6 1198 aaKnown RBP15.08■□□□□ 0.01
COL4A1-201ENST00000375820 MAD1L1Q9Y6D9 718 aa15.08■□□□□ 0.01
COL4A1-201ENST00000375820 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 SGSM2O43147 1006 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 PFKFB1P16118 471 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 USP17L12C9JPN9 530 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 USP17L21D6R901 530 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 DKC1O60832 514 aaKnown RBP eCLIP15.08■□□□□ 0
COL4A1-201ENST00000375820 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
COL4A1-201ENST00000375820 MX2P20592 715 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 NCAPG2Q86XI2 1143 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 ANKRD13CQ8N6S4 541 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 PPP4R1Q8TF05 950 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 ATP2A3Q93084 1043 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 ZNF653Q96CK0 615 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 CAPN7Q9Y6W3 813 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms