RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 NLRC4Q9NPP4 1024 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 DKC1O60832 514 aaKnown RBP eCLIP23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 ATP8A2Q9NTI2 1148 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 LAD1O00515 517 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 HOXA7P31268 230 aaPredicted RBP23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 SLC8A1P32418 973 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 RNF14Q9UBS8 474 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 COMMD10Q9Y6G5 202 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 CCDC160A6NGH7 325 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 MYL1P05976 194 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 PLS1Q14651 629 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 CPSF2Q9P2I0 782 aaKnown RBP23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 NEO1Q92859 1461 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 ARHGEF35A5YM69 484 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 SLC35F6Q8N357 371 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 LSM14BQ9BX40 385 aaKnown RBP23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 RABEP2Q9H5N1 569 aa23.41■■□□□ 1.34
TGFBR1-202ENST00000374994 AATFQ9NY61 560 aaKnown RBP eCLIP23.41■■□□□ 1.345e-6■■□□□ 11.7
TGFBR1-202ENST00000374994 KRT5P13647 590 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 CTSWP56202 376 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 HHATQ5VTY9 493 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 APOA5Q6Q788 366 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 SYMPKQ92797 1274 aaKnown RBP23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 STAT1P42224 750 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 EFCAB13Q8IY85 973 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 CFAP157Q5JU67 520 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 VCXQ9H320 206 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 FMNL1O95466 1100 aaPredicted RBP23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 OR52Z1P0C646 297 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 FAM204AQ9H8W3 233 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 SAP30BPQ9UHR5 308 aaKnown RBP23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 FAM169AQ9Y6X4 670 aa23.4■■□□□ 1.34
TGFBR1-202ENST00000374994 CLCN6P51797 869 aa23.39■■□□□ 1.34
TGFBR1-202ENST00000374994 PANX2Q96RD6 677 aa23.39■■□□□ 1.34
TGFBR1-202ENST00000374994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.39■■□□□ 1.345e-7■■■■□ 23.8
TGFBR1-202ENST00000374994 SLFN14P0C7P3 912 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 XRCC5P13010 732 aaKnown RBP23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 PHKG2P15735 406 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 EPHB4P54760 987 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 BIRC3Q13489 604 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 PI4K2BQ8TCG2 481 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 MCUR1Q96AQ8 359 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 DHTKD1Q96HY7 919 aaPredicted RBP23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 MAK16Q9BXY0 300 aaKnown RBP23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 PPANQ9NQ55 473 aaKnown RBP23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 ATG3Q9NT62 314 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 SMCO2A6NFE2 343 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 EXOC3O60645 756 aa23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 RRP15Q9Y3B9 282 aaKnown RBP23.39■■□□□ 1.33
TGFBR1-202ENST00000374994 NCAPH2Q6IBW4 605 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 METTL14Q9HCE5 456 aaKnown RBP23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 CCDC62Q6P9F0 684 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 NELFCDQ8IXH7 590 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 ZNF219Q9P2Y4 722 aaPredicted RBP23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 KRIT1O00522 736 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 ZNF589Q86UQ0 364 aaPredicted RBP23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 DNAJC10Q8IXB1 793 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 ZBTB38Q8NAP3 1195 aaPredicted RBP23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 MAP7D1Q3KQU3 841 aa23.38■■□□□ 1.33
TGFBR1-202ENST00000374994 KCNK3O14649 394 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 GUCY2FP51841 1108 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 LGSNQ5TDP6 509 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 P3H4Q92791 437 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 CCDC38Q502W7 563 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 CCDC169A6NNP5 214 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 BAIAP2L1Q9UHR4 511 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 NEK8Q86SG6 692 aa23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 BZW2Q9Y6E2 419 aaKnown RBP23.37■■□□□ 1.33
TGFBR1-202ENST00000374994 PTGDRQ13258 359 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 ARMCX3Q9UH62 379 aaPredicted RBP23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 FAM184BQ9ULE4 1060 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 A0A087WUV0 522 aaPredicted RBP23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 SEC31AO94979 1220 aaKnown RBP23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 LARGE1O95461 756 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 H2AFZP0C0S5 128 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 H2AFVQ71UI9 128 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 AGTPBP1Q9UPW5 1226 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 hCG_1642624A0A1W2PR95 340 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 IWS1Q96ST2 819 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 KCNG1Q9UIX4 513 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 KLHL14Q9P2G3 628 aa23.36■■□□□ 1.33
TGFBR1-202ENST00000374994 PARD6BQ9BYG5 372 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 MRPL44Q9H9J2 332 aaKnown RBP23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 USP17L12C9JPN9 530 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 USP17L21D6R901 530 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 RBL2Q08999 1139 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 FBXO38Q6PIJ6 1188 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 AK8Q96MA6 479 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 MYCBPQ99417 103 aaPredicted RBP23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 TUBGCP2Q9BSJ2 902 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 VCX3BQ9H321 246 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 SERPINA10Q9UK55 444 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 TERF2Q15554 542 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms