RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 MKL1Q969V6 931 aa23.87■■□□□ 1.41
SYNC-201ENST00000373484 VCPKMTQ9H867 229 aa23.87■■□□□ 1.41
SYNC-201ENST00000373484 CLIP2Q9UDT6 1046 aa23.87■■□□□ 1.41
SYNC-201ENST00000373484 E7EWF7 191 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 SLC27A2O14975 620 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 KDM4AO75164 1064 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 NOVP48745 357 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 CREB3L3Q68CJ9 461 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 R3HDMLQ9H3Y0 253 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 ZKSCAN5Q9Y2L8 839 aa23.86■■□□□ 1.41
SYNC-201ENST00000373484 HSPA8P11142 646 aaKnown RBP23.85■■□□□ 1.41
SYNC-201ENST00000373484 VCAM1P19320 739 aa23.85■■□□□ 1.41
SYNC-201ENST00000373484 HOXA7P31268 230 aaPredicted RBP23.85■■□□□ 1.41
SYNC-201ENST00000373484 CTCFP49711 727 aaPredicted RBP23.85■■□□□ 1.41
SYNC-201ENST00000373484 PABPC4Q13310 644 aaKnown RBP eCLIP23.85■■□□□ 1.41
SYNC-201ENST00000373484 STOX1Q6ZVD7 989 aa23.85■■□□□ 1.41
SYNC-201ENST00000373484 ZFYVE28Q9HCC9 887 aa23.85■■□□□ 1.41
SYNC-201ENST00000373484 SYNPO2Q9UMS6 1093 aa23.85■■□□□ 1.41
SYNC-201ENST00000373484 RLFQ13129 1914 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 KIAA1755Q5JYT7 1200 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 LPAR1Q92633 364 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 CASP8AP2Q9UKL3 1982 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 NEK4P51957 841 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 TRDNQ13061 729 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 PARK7Q99497 189 aaKnown RBP23.84■■□□□ 1.41
SYNC-201ENST00000373484 GOPCQ9HD26 462 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 ZSWIM5Q9P217 1185 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 PNMA3Q9UL41 463 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 STX8Q9UNK0 236 aa23.84■■□□□ 1.41
SYNC-201ENST00000373484 RNF20Q5VTR2 975 aa23.83■■□□□ 1.41
SYNC-201ENST00000373484 ADGRA2Q96PE1 1338 aa23.83■■□□□ 1.4
SYNC-201ENST00000373484 CYP2C8P10632 490 aa23.82■■□□□ 1.4
SYNC-201ENST00000373484 NOM1Q5C9Z4 860 aaKnown RBP23.82■■□□□ 1.4
SYNC-201ENST00000373484 IQCA1Q86XH1 822 aa23.82■■□□□ 1.4
SYNC-201ENST00000373484 NCOA7Q8NI08 942 aa23.82■■□□□ 1.4
SYNC-201ENST00000373484 TMEM63CQ9P1W3 806 aa23.82■■□□□ 1.4
SYNC-201ENST00000373484 TLR2O60603 784 aa23.82■■□□□ 1.4
SYNC-201ENST00000373484 LRRC47Q8N1G4 583 aaKnown RBP23.82■■□□□ 1.4
SYNC-201ENST00000373484 ASCC2Q9H1I8 757 aaPredicted RBP23.82■■□□□ 1.4
SYNC-201ENST00000373484 USP17L15C9J2P7 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L13C9JLJ4 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L11C9JVI0 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L18D6R9N7 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L22D6RA61 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L17D6RBQ6 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L19D6RCP7 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L20D6RJB6 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 OSBPP22059 807 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 USP17L24Q0WX57 530 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 RCSD1Q6JBY9 416 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 RALYLQ86SE5 291 aaKnown RBP23.81■■□□□ 1.4
SYNC-201ENST00000373484 SPICE1Q8N0Z3 855 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 TTC14Q96N46 770 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 ZKSCAN3Q9BRR0 538 aa23.81■■□□□ 1.4
SYNC-201ENST00000373484 RPAP3Q9H6T3 665 aaPredicted RBP23.81■■□□□ 1.4
SYNC-201ENST00000373484 F5H6K3 240 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 WDR46O15213 610 aaKnown RBP23.8■■□□□ 1.4
SYNC-201ENST00000373484 LBX1P52954 281 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 KLRC3Q07444 240 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 CATSPERGQ6ZRH7 1159 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 CYB5R4Q7L1T6 521 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 MTERF4Q7Z6M4 381 aaKnown RBP23.8■■□□□ 1.4
SYNC-201ENST00000373484 GMCL1P1Q8NEA9 526 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 GPR25O00155 361 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 HSPA4P34932 840 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 IRX3P78415 501 aaPredicted RBP23.8■■□□□ 1.4
SYNC-201ENST00000373484 UVSSAQ2YD98 709 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 TSGA10IPQ3SY00 556 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 CCDC178Q5BJE1 867 aa23.8■■□□□ 1.4
SYNC-201ENST00000373484 NDUFB10O96000 172 aa23.79■■□□□ 1.4
SYNC-201ENST00000373484 DGKHQ86XP1 1220 aa23.79■■□□□ 1.4
SYNC-201ENST00000373484 MB21D2Q8IYB1 491 aaPredicted RBP23.79■■□□□ 1.4
SYNC-201ENST00000373484 RASEFQ8IZ41 740 aa23.79■■□□□ 1.4
SYNC-201ENST00000373484 TMEM87AQ8NBN3 555 aa23.79■■□□□ 1.4
SYNC-201ENST00000373484 KCNB2Q92953 911 aa23.79■■□□□ 1.4
SYNC-201ENST00000373484 ZSCAN10Q96SZ4 725 aaPredicted RBP23.79■■□□□ 1.4
SYNC-201ENST00000373484 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.79■■□□□ 1.4
SYNC-201ENST00000373484 RAD21O60216 631 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 TOP1P11387 765 aaKnown RBP23.78■■□□□ 1.4
SYNC-201ENST00000373484 C17orf99Q6UX52 265 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 SMCR8Q8TEV9 937 aaPredicted RBP23.78■■□□□ 1.4
SYNC-201ENST00000373484 TMEM47Q9BQJ4 181 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 A0A0G2JMZ2 1700 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 TNKSO95271 1327 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 MGAMO43451 1857 aa23.78■■□□□ 1.4
SYNC-201ENST00000373484 COL11A1P12107 1806 aaPredicted RBP23.77■■□□□ 1.4
SYNC-201ENST00000373484 ENAHQ8N8S7 591 aaPredicted RBP23.77■■□□□ 1.4
SYNC-201ENST00000373484 P2RX7Q99572 595 aaKnown RBP23.77■■□□□ 1.4
SYNC-201ENST00000373484 UBAC1Q9BSL1 405 aa23.77■■□□□ 1.4
SYNC-201ENST00000373484 TANGO6Q9C0B7 1094 aa23.77■■□□□ 1.4
SYNC-201ENST00000373484 ZKSCAN1P17029 563 aaPredicted RBP23.77■■□□□ 1.4
SYNC-201ENST00000373484 ANKS1AQ92625 1134 aa23.77■■□□□ 1.4
SYNC-201ENST00000373484 TSPY26PQ9H489 355 aa23.77■■□□□ 1.4
SYNC-201ENST00000373484 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
SYNC-201ENST00000373484 BCRP11274 1271 aa23.76■■□□□ 1.39
SYNC-201ENST00000373484 HERVK_113P62684 666 aa23.76■■□□□ 1.39
SYNC-201ENST00000373484 SLFN13Q68D06 897 aa23.76■■□□□ 1.39
SYNC-201ENST00000373484 ZNF296Q8WUU4 475 aaPredicted RBP23.76■■□□□ 1.39
SYNC-201ENST00000373484 SYCE3A1L190 88 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms