RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 ZSCAN29Q8IWY8 852 aaPredicted RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 FBXL16Q8N461 479 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 HNRNPLLQ8WVV9 542 aaKnown RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 GOLGA1Q92805 767 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 ZNF274Q96GC6 653 aaPredicted RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 DRC1Q96MC2 740 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 XPO4Q9C0E2 1151 aaKnown RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 CCNL1Q9UK58 526 aaPredicted RBP8.21□□□□□ -1.1
CTPS1-201ENST00000372616 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.1
CTPS1-201ENST00000372616 TAF5LO75529 589 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 SLC3A2P08195 630 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 CASQ1P31415 396 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 SLC27A3Q5K4L6 730 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 INTS5Q6P9B9 1019 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 Q6ZUG5 572 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 TMC7Q7Z402 723 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 SLC10A4Q96EP9 437 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 IFNKQ9P0W0 207 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 MYH14Q7Z406 1995 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 H7C1W4 665 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 STX10O60499 249 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 RPS6KA5O75582 802 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 URI1O94763 535 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ATP5JP18859 108 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 EVCP57679 992 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 STK38Q15208 465 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 TBCELQ5QJ74 424 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ARMCX5Q6P1M9 558 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 CC2D1AQ6P1N0 951 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 OLFM4Q6UX06 510 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 KRBA2Q6ZNG9 492 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 BPHLQ86WA6 291 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ELOA2Q8IYF1 753 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 SCG3Q8WXD2 468 aaKnown RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ERCC4Q92889 916 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-201ENST00000372616 FAM227BQ96M60 508 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 AGXT2Q9BYV1 514 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 ZNF358Q9NW07 568 aa8.2□□□□□ -1.1
CTPS1-201ENST00000372616 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 TOP1P11387 765 aaKnown RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 CAPN2P17655 700 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 MPSTP25325 297 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 OAS2P29728 719 aaKnown RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 ACTN2P35609 894 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 IRX3P78415 501 aaPredicted RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 MYL5Q02045 173 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 STK3Q13188 491 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 FAM182BQ5T319 152 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 CLEC4GQ6UXB4 293 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 CEP112Q8N8E3 955 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 NSUN7Q8NE18 718 aaKnown RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SREK1Q8WXA9 508 aaKnown RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 ZNF516Q92618 1163 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 TMX1Q9H3N1 280 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 BCORQ6W2J9 1755 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 A0A0D9SFI3 127 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 PTPDC1A2A3K4 754 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SERPINC1P01008 464 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 PCCAP05165 728 aaPredicted RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 MCM3P25205 808 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 TXLNAP40222 546 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 FANCCQ00597 558 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 MCMDC2Q4G0Z9 681 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SYNE3Q6ZMZ3 975 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 HDXQ7Z353 690 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 UBE3BQ7Z3V4 1068 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 LINC00116Q8NCU8 138 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 USP28Q96RU2 1077 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
CTPS1-201ENST00000372616 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
CTPS1-201ENST00000372616 SPEF2Q9C093 1822 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
CTPS1-201ENST00000372616 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 C4BP0C0L5 1744 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 A0A1B0GUL7 405 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 VAMP1P23763 118 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 CMA1P23946 247 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 UBASH3AP57075 661 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 SCRN1Q12765 414 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 SF3B2Q13435 895 aaKnown RBP8.18□□□□□ -1.1
CTPS1-201ENST00000372616 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
CTPS1-201ENST00000372616 HSP90B2PQ58FF3 399 aa8.18□□□□□ -1.1
CTPS1-201ENST00000372616 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
CTPS1-201ENST00000372616 ZBTB38Q8NAP3 1195 aaPredicted RBP8.18□□□□□ -1.1
CTPS1-201ENST00000372616 CCDC34Q96HJ3 373 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms